Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_149040.1
- Aligned Length:
- 5458
- Identities:
- 216
- Gaps:
- 5210
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTTAAGTCAAATTGTTTATGTAGACAGGAACCCAACAAAAATATTTGCCCAGGACCTTGCGCGCCCTAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCTCTGGAGAAAAGCATTTGCCTACAGAAATAAACCATTTCCTTCCTCAGCCTATATCAGTAACAAAGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGCTTTGGCCACTATCTGCCACTCCTTTCTCTTATTCCTCTGTTTGTTTAGAAGCGGATCAGGAAAGAGGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCATTTCCTCAGATCCCTCAAAGTCCCCAAAAAAGAACTCAATAAGCATTAGCTGTTATCATTTTTCAAGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGGTTGTGTTTTATTTTCCGTTTTTCTCCTTTCCTTTCATTCCAAAAAGCCTCCTTTCTTTAATTCTATAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTTCTTTGGTCCCTGAGAGATTCTTGTTTGTTTATTTTTGTTTGTTTTTTTACAATTATTCCAGAGATCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAATCTCTAGCACAGAAAAAAAAAATTCCCTTCCTTCTTAGCATCCTTCAGTAGTTGGACTCGGTGAAAATTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACTGCCCCCAGCCCTTTGCAGCACTGCTCTCAAGGCCAGTAGGCTGTACCTGGGCCCTGACTTGAGAGGAAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACAAGAGAAGAGCATTCAGTGGGTTAAAAAAAACAGATCCGAAGGATGAAGGGAATCTACCTTCAGATTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGAAGGTCAAAGGTTCTAGGAATGAAGGTATTCAACATGGCAACGCTGGAAGCAAAGTAAACGTTCAACAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGATGATGATAAAGTAAGTGACCTTGAAACCAATAGGACAACATGGAGCTCATTACGATTATGTTTAGGGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGAGGAGACATGGAATAGGGCTTATGTGCAATAAAACAGAGAGGAAAGGAGGAGGCAATTTATAAATGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCCTCTGATTGTGTAAAATTAGGCATCTGTTAAAAAGACGGGAATGAGGTAATAATAGAGTTAACATGTTAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTAATTGGATAATAGTATTAGTTGTTTCTTTTCTCTAACTGAATATAATATATTACTTTTATAATTTAGTAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTTCTTTTCAAAGGAGGTACACCCATGCCTTTCTCCTGGCTATCTGCAGCTCAACAATGAGGGACTTGGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCCAGGCCTCCATCACACTAAACAGTCCTGGCCGACTATGATACCCTTCCTCTTTTCTCCCTAATTTGTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTACAGTTTGCTCCGTGGACGTGTGAAGCAATCTCTGGGGGTGGAGCTGAGGAATCTGCATTATTAACAGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTGGGAGATTCTTACACACACTAAAGTTTGGACAAAGATTGCTTATTTTTTCTGCCAAAAATCTTAACCACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGGACTTGCACGATCTATGTTATTTCTTGAAGCAAAGTTAATCCACCGATATTATGCCTTGTGTGTATGTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTAAGTGCCCAGTGAACACAGTTCCATTTATCCTCAAATATTTTTGTGTAGAAATTTTCGATTATAATTTATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATGGTTTTTGCTTAGAAAGCCACCTTATAAGCAAGGTATCCTGTCATAGGATCACTACTTTCTTTCCCTCTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGAGTCCTGCCATAATTAGGGCTGAGTGACTTTTCGGGACACACTTTACTTTGTTTCTTTGATCACAACAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACACAGGACTCTCGGGTCCTGAGGCTGGCTGAAGGGTTTCAGTTTTCCTTAATTGTCTATCATTATAGGACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGAAATACCCACTCATGATCCCACTGCTTCCAGCCCTCAAACTAAGAATGGAGTCTCTAGTCGTGCACATTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGGCCTCAGGGCTCACAAGGCAGTGAGGCTGAGGTGGGGCGGCCTGTCTGCGTCTGCGTCCCAGCAGAGCCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGGTCCTCGCTGGCACTGCAGGAAGGAGGCCCCTCTGAGGCGAGGAGTGTTCTGACCTACAAGGCTGTCCAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTTTTGGCTTCCCTGGGCAACATTGGAAGGAGGAAAATTGTCTTAGGCCACACATAAAATACACTAATGATAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGATGAGCTTTAAAAAAAAATGCAAACAAATTTCATAATGTTTCAAGAAAATTTATGAATTTGTGTTGGGCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTCAAAGCTATCCTGGGCTGCATGCAGCCTGTGGGCCATGGGTTGGAGAATCTTGCTTTATGATTTTACTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGACAGAAACTAAGTGCTAACATTTCCCCCAATCACAATTCTATTTTACCTTTTTAAAAACTCTAAAGGGCAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AATTTTGCTAATCTTTTCTAGAAATATAAAAACAAGCAAATATGTTTTCTAAAACAAACCAAGGCTTTTCTCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGGAATTTGCAGGCATAGCACGAACTCCTTCCTCACTGCTATTTCTTGAGAGGGGCTGTTAGGCTGTGCTGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTCTGCTTAAGGACGAGAGGCCAGGTACACAGCCTGAGAGGCCAGTCATTGTGCCATGTTGTTGTCAGGAGTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCAGTGTCCATCTTGATAAGGCTTTGCTAAAACATACTAATACAAACTTCCATTACCTCCTGTGTTTCTAAATA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACATACCAAGTTATTTTAAGACTCATGTTTTCCTTTATAATCATTTGAAATTTCTGCCTAGTGTGAAACAACC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATCTAGATTCTCACAGAATTCATGAATAATACTGAAATCCACTCTCCTAAACAGCAGCAGTTTCAAGTAAGTCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCAGTAAACACAATGTCCAAATTTATTTTTAAAGCTTTGAAGATAAATGATGAAGCCTCCTATGAGATTATCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTATGTAGCGGAAGAAAAGAATCCTTGAGGGTCAAGTTGCTAGGGCAGTCACAGAAGCCAGAGCCATGGGCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAGGTCCTGAGGCCTCTCTGAAGGATGTGCGTGGTCATCCACTATGGGTGCAGCTGGTGTTGAGAAACTAAGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGATGCACCACCTCTGTTGTTCCAAGGCTAGACCAACAGTGGGCATTCTCTAGATCTATTGTCTCCTTTACGTA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTAGGGGGAAAACCACTTCTACTGTGCAGGGATCTGCCCCTTTAAACACATAAATACCACTTAATCCACTGCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCAACAGAGGAAATGACCACTGGCCTGGAGGCCTCCAAAATTCCTTCTCTTTTTCTTTCTTTCAAGTCAAAGGT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CATGGTTCATTTCGAGTTCCAATGCTATTTTCTAAATTTTGTTTTAATCCAGATCTCATGACTTATTTCTCATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTCTTTCCTTCCTGAACAATTCAGTGCTAAAACCATTAGGTAGGGCAGAGCGAAGACTGTATGGGCGCCAGGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GAAGGAAACCACAGTGGCACAGAGTGCAGTGCCTGCATCAGGACAGGGTCAGGAGGCAGTCCTGCAGAGGGGCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCTCAGCATGGTGTGTTCAAGTCCTACAGAGTATTGGAGCCCAAAGGAGAAAAGTAACTTTACAATGGGAATGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGGCAGACATCACCTGACTCAAGTGTCAAAGTGAAGAAACATCATCAATGATGTTTCCATTAAATGGAAATCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGTGCCACCTGACAAGAGGCATTTAGGACTTCTGTGATATTCCCTCTAAAGATGCATCACCTGAATCTGACTAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAAGAAACATCAGAAAAACTCAAATTGAGGAACACTCTGCAAGTTCCCTCAAAACCCTGGCAATGGCAACTAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAGATGGCTTTTGTGAGAAGAGCGATTGGTGTCCACACCTGCTGGTGCTGAGCACAAGACAATGCACATGTGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTCTTGAAGGAAGAAACTTTAGAAACGTCATCTTCAAGGTGTCAATGACTTGTCTACTATAGCTGCTGCCTCAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CGTCCACTTTTAGACCCGGCATCAGCTGTGTGAAACCCAGTCGCACCCTGCCACCTTTGGTCTAGGTGTGACTT 3848
Query 1 ------------------------------------------------------------------ATGGAGTC 8
||||||||
Sbjct 3849 CTCTTCCTTAGAGGGGCATGATAGAGCTCGTGTGTTTCTTTTCTTTTTTTTCTTTTTGTTTTTGAGATGGAGTC 3922
Query 9 TCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGC 82
|.|.|||||..|||||||||||||||||||||...||||.|||||||||.||||||||||||||| ||||||||
Sbjct 3923 TTGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGTAACCTCTGCCTCCCA-GTTCAAGC 3995
Query 83 GATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATT 155
.|||||.||||||||||||||..||||||||||||||.||.||||.|||||||||||..||||| |||||||||
Sbjct 3996 AATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGAACCACCACGCCTAGCTAATTTTTGTATT 4069
Query 156 TTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCAC-CACCT 228
|||.|..||||.||||||||.|||||||.|.|||||||||||..|||||||||||||||||||||||| ..|||
Sbjct 4070 TTTAGCAGAGATGGGGTTTTACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACTTGCCT 4143
Query 229 CGGCCTCCCAAAGTGTTGAGA----------------------------------------------------- 249
|.|||||||||||||.||.||
Sbjct 4144 CAGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCATGCCTGGAGGAGCCCATGTGTTTCTCATCTCACC 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 AACCCAAAGCCCAACTCACTCCACAGCTGCTGACCATGAGGAAACCTAAGGTCAACACCGGAGTCAGGCAAATA 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 AGCCACCCCCCCACCCCCACCCGCATACACACTTGTTTTATTTAAACTGGCCAATCCACAACTGCCAGAGGAAA 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 GCCCGTGGGCCTTCATGGAGGCCTAGTCTCAAGCCCTCACTCTCCCTTCCCACCTGCCGGTCGAGTGCCCTGCT 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 GTCTCTGGACTTCCCATCGGCCCTCAGGGACGTAAGTCTGCCTAGAGGAGAGTTGACACACCAAAAACAAAACT 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 TCTGTTTCAAAAATCCAGTCCCTGAAGGCAATCGGGAAAAAGTGTGAAGAACAAGGGCAGAGCTTCCCAACTTT 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 GAGCCTGAGTGGTGAAAGGAAGCAAGAAGAAAAGGGGTTTGTGGGTGCTCGGAGGAGCCCCACAACTATACCCC 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 CATCCTCTCCAAGATCCACCAGAACAGATACCTACATAAACTAGAGGCATTTGAGAACGAAGGCCTCTTGCCCC 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 CGAGGCAGCAGTAGCAGACTTGTATGGCCCACATGTATTAGTCTGTTCTCACACTATTAAGACATACCTAAGAC 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 TGGGTAATTTATAAAGGAAAGAAGTTGAATTGACTCACAGTTCAGAATGGCTTGGGAGGCCTCAGGAAAGTTAC 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 ATCATGGTGGAAGTGGAAGCAAACAGGTCTTTCTTCACACGGTGGCAGCAAGAAGTGCCAAGCAAAAGGAGGAA 4957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4958 AAGCCCCTTATAAAACCATCAGATCTCATGAGAACTCACTATCACGAGAACAGCATGAGGGTAAATGCTCCCAT 5031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5032 GATTACATTACCTCCCACCAGCTCCTTCCCACCACATGTAGGGATTATAGGAACTATAATTCAATATAAGATTT 5105
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5106 GGGGTGGGGACACAGCCAAACCATATCAGAGGATGAGCTAGGGGTGCACAGGGGGAGTAGGCTGTGAAGGACAT 5179
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5180 GTAGTACCCACATCTCTAGGCCTGCAGGTGCCTTTCCGACAGGAACAAGAGGAACGTGGTAACATTCCAGTGTG 5253
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5254 GCCTGGCCAGCAGGCACAGCCAGGTAATGTATGGCGCAGCAGGCACCAATGTGGCAGGGGAGGGCCACGTGCTC 5327
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5328 CTGTGTCTACCCCAACACAAAGGTGCTTCTCCATAACCACTCCTACCCGCCTCCCCCAAAACTGGCTGAGTTTA 5401
Query 250 -------------------------------------------------------- 249
Sbjct 5402 AGTTTCTGCAAACTGGCAAAATGAGGGCTTGAAATAAAAATTGTCTGTGGACTAAA 5457
