Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10792
Subject:
NR_164631.1
Aligned Length:
3772
Identities:
223
Gaps:
3524

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCATTCGCTCCAGGGTTTTGGGACCCTAGGTTGCGGAGTCCTTACCCTACCCTGGCCTCTCGAGCAGTTGTCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATAACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGCCCGTCCCCACCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGTTGGAGAGGCGGTAACGGAGGCACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCCTGCTGCACCCCGCCGTTTCTACGGGGCTCAGAAACCAGTTTGTTTGTTTCGTCGGGGTAGTGTCGACCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGATGTCAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTTCAAAATGCGGGATGGTACCTCTGCTTTATTAAGCCCCGTAGGAAGACTGCCACACCTAGACTGATGCTTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TAGTCATCACCGTTATTCCTACTAACGTCCTGTGTCACTGAGTTTTTTAAATGTCTAGCATATCTGTAAAGATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCTTAGAAAAAGAATCATGGAGAAGTATGTTAGACTACAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGTTAAATCTACAGAAGATGGCAGACAGTATGTTATCAAGGAAATTAACATCTCAAGAATGTCCAGTAAAGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGAGAAGAATCAAGGAGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAAATATTGTCCAGTATAGAGAATC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTTGAAGATTTTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAAATTCTTCAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CGAGACATTAAATCTCAGAACATATTTTTAACTAAAGATGGAACAGTACAACTTGGAGATTTTGGAATTGCTAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAACAAACCTTACAATAATAAAAGTTTGAAGCTGGCAGTATGAAAAACCTGGTACTGAAGATAATATCTGGAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGTTATTTAAAAGAAATCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGGGATAGACCATCAGTCAACTCCATATTGGAGAAAGGTTTTATAGCCAAACGCATTGAAAAGTTTCTCTCTCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCAGCTTATTGCAGAAGAATTTTGTCTAAAAACATTTTCGAAGTTTGGATCACAGCCTATACCAGCTAAAAGAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAGCTTCAGGACAAAACTCGATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCCTGCCGCTAAATATGGAATA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCTTTAGCATATAAGAAATATGGAGATAAAAAATTACACGAAAAGAAACCACTGCAAAAACATAAACAGGCCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCAAACTCCAGAGAAGAGAGTGAATACTGGAGAAGAAAGGAGGAAAATATCTGAGGAAGCAGCAAGAAAGAGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCTGGAATTTATTGAAAAAGAAAAGAAACAAAAGGATCAGATTATTAGTTTAATGAAGGCTGAACAAATGAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGGCAAGAAAAGGAAAGGTTGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTGCTAAGTGCTGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGAAGTGGTGAAGTAAAGCCTTGAAGATTAAGTTCTCAGAAGATGCTTCTTAATCTGATCCCTGTTGTCTCTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAACTTCATCACCATCCATTCCCTACCACATACTGTATGCTCTATTCATGCTGAAATGAAGACTATATTTGTAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTCATTACTATATGTGGTTTGCCAAATCTCTTTGTCTTTGCACTTGTGTTTCCTTTTACTTAATAGCACTCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CATCCCTCCTCACCCTCACGTCCCACCTCCATCCATTTAGCTAAATAACCAGTTACATAGATGAGTTAATCTAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACATTCCTTCTGGGTAGATCCACCCTATTTAACCTTGGGCACATTACTGAACTTTTCTGAGCTTTGGTTTCTTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATTTAAAAAAAAAAAAAAGTTTTTTTTCCAAGAACAGTGCCTGGAACCTGTCTGGCAAGGGCTTCTATAGTAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTCCCTTTCCTTTCTTTGTTCTGCCAGTCTGAATCTTATACTTCCTCTTTTATTCATACAGCATCCTATACATA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCTCTATTTGTAGTTGGTAGAATTCTAAGATGGTCTCCAAGATTCTCAACTGCGGTATACACACCTTGTGTTAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCCATTCCCTTGAGTATAAGTGGTACCTGTAAATACTGTAGTATAGCAGCTCACTTGATTAGGTTATGTTATAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGCAAGTGGTGATGGGATGGTCTCTCCCAGGGTTACGTTAACATATAAGACTCCTTCATAGCTGACTGGAAGGG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAAAAGAAATTAGAGAGAGAGAATTCTGCTCACCTGGAAGATAGTAAACATTCATGTGGCAAAACAGTAGAGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GACCTCTACAAGTAGTGGTCTCTAATGAGCAACTAGCAAGAAAATTGTGGTCCTAGTCATACAGCCACAAGGAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ATTAATTCTGCCAAGAACCAGTAAACTTGGAAGAGATCCTGAGTCTCAGGTGAGAATTGTAACCCTGGCTGACA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCTTGATTTCTGCCTGGTGAGATCCTGAGGAGGGGACCCAGCTAAATGCACCCAGATTCCTGAGCCAGGGGAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGAGATTATAAATAGATATTGTTTTAAGCTACTAAATTTGTGATAGTTTGTTATACAGCAATAGAAGATGAATG  2738

Query    1  ---------------------------------------------------------ATGGAGTCTCGCTC-TG  16
                                                                     |||||||.|||||| ||
Sbjct 2739  CACTAATTTGTATCATTGAATAAACTGTAAGTCAATACATCTTTTTATTTTTTTGAGATGGAGTTTCGCTCTTG  2812

Query   17  TTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTC  90
            ||.||||||||||||||||.||||..||||||.|||||||||||||||||||||||.|||||||||||||||.|
Sbjct 2813  TTACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCC  2886

Query   91  TGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGA  164
            |||||||||||||.||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.||.||
Sbjct 2887  TGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTGTATTTTTAGTAGA  2960

Query  165  GACGGGGTTT-TGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCC  236
            |||||||||| || ||||||.|||||||||||||.|||||||.|||||||.||||.|..|| .|||||||||||
Sbjct 2961  GACGGGGTTTCTG-CATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGACCTGCCTGCCTCGGCCTCC  3033

Query  237  CAAAGTGTTGAGA-------------------------------------------------------------  249
            |||||||.||.||                                                             
Sbjct 3034  CAAAGTGCTGGGATTACAGGCGTGAGTCACCGTGCCCAGCCTAAGTCAATACATCTTCAAACTATAAGTTTCAC  3107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3108  TCATGTACACCCATTAATCTTGATATTTAGATGTACAATAGATACTTGTCAAATTGGATCAATTATAATTCTTG  3181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3182  GTTTTTTTTCTCCAAAAGTTATAATTTGAATAAAAGTTTGTTTTATCTAGACATATACATTCTGCCCTGGATTT  3255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3256  ATAGATTTGTTTTTCAGTCTCTTGAGGTGCAGAAGTTCTTCATATCATAGTAATAATTCATTAAGAGTAACTTT  3329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3330  TTCCAAATTTGTATTAATATAGATTATACAGTGTTTTTAGTAGTATAATTTTATCTTACCTTTAAGTAGAACTT  3403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3404  ATTACCTCCTGAATGATCAGGAATGACTTAGAATCTGGTCCATTCTAAAATAACTAACCTCACATCTTACCTGA  3477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3478  TTGGAAAGAGAAAGCTTATCAACTTGTACTCCTTCAGATCTCAAGCATTTTTTTATCAAGTCCGTGATTAGCAC  3551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3552  TGAAGTTTTGATGATTTATTCTTCTCCCTTTTGTGTAATAAAGTGCTTTTTCCTATGATGTCTAATACAGTATT  3625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3626  AATCAGTTTTATTAATGTTTAATAACTGAGACAATTTTCAAGTTACATACTGTGTACTGAATAGATTTCTGCAT  3699

Query  250  ------------------------------------------------------------------------  249
                                                                                    
Sbjct 3700  CACTTTATAAACTTCTGTAATGCTTTCATTGAAGATTAATAAAACAATTTATTTTCCATGATTTAAAGGAAA  3771

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