Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10792
Subject:
XR_001753080.2
Aligned Length:
3221
Identities:
217
Gaps:
2972

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGACCCGAGATTGCGCTACTGCACTCCAGCCTGGGCGACAGAGCGAGGTTCCGTCTCGAAAAAAAAAACAACGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGGGACTCACTTCGGAGAAGCTGCCCTCTCTGCAAACTTATTTGAAGATGTGGTCTTGCTATGTTGCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGTGCAGTGACTATTCACAGGCCGGATCTAGTGCACTGCAGTCTTGAACTCCTGGCTTACAGTCCTGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTCTGAGAGGCAGGGGAAGAAACGGCCACCATGCTCTGCAGCTAGGTCTCAGCATGAGGACCAAGAACCCTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGTTCCTCCACTCATCGGAGCCGTATCATTTTGGTGCATTGGCCAGGAAAGGAAATTCAATCATGAGACTGAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGGCCCAAGACTCTGGATATGGTGGCGACTCAACTGAAATGGTAAAATAAATGACATTAACATTTAAAAAGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAACTCAGATGAAAGCATACACAGATGTGCATGCATACACATAACCAAACACACACACACACACACACACACAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACACACACACACACCCCAAACCAAACCAAAAAGGTTGACCCTCAATCTAACCTGGCTGTAATAAGGCAGCCAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TATGTATTTGTTGGTGCCTATTATTACGTTTCTCGTATAATTACTTAACACAAAATTTAAGTTACAACCTCTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCTTTGAAACCAGGTGGGAAACATATAACTTGCAAATATCAAGAATTACATAATGTAATTTAATCAAATATG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAATTTATAATATAGCAAAAATGGTACTAAATACTTCAGAAACTTTCTAAGAGGCAGATCATAGTATAATACCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTACAAATATATCCATTCAATTGAGTAATATGCAGTAATTGAAAATGACAGCTACATCATCAGTAAGAGACTAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTATTAATAGAATAAGGGATAACAGAATATTGATAACTGATAGGTAGGTCTAGTTTAAGGACTAGTGGCAGGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACATTAAGTGAAAAAAAAAGCAGGTGTATAAAAAAATGTAGAGCAAGATCCTAGCTGTGTAAAGATATGCTATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTGTTACAGACAGACACAGACACACACACACACACACACACACACAAAATCTAAGGGGAGAAGGTCCTGGTCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGACTGAGGGGAGAGGGACACTTAATATTTGCTTCCTTGTACTCCTTGAATTTACAAATTACTTTTTTTACTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTCAAATACAAAATCACAGTTTACCTAAGAAAATGTTTAGGAGTAATGTTAAATGAAAAAAGAGTATCATAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAAGCATGAAAACACATCAGAAGTGGAAAAAGATTACCAAAATGCTAATAATGATATTATAAGTTTTCTGGTTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTAATTTTCAGTAAATTTGCTATATTACTTTTGTTGCTATTTAGTACTAGTAAGTAGTTATATTCCACTCCAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGTGTAGCAAAATAAAAAGTAATAAAAAAGAAAAATAGAAAATAGTTATATTACTTTTATGAAAGAAAAAAAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTATAAACCAACTTTCTCAAGCTAGGATTTGTTATTCCCCTCCCCAGAAGAAAATGAGAATGTGGATGGACTAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACAAGTAGGTGTGTATATACACAAAAAAGAGATGAGATGATACCAGAAGTTGAGTTCAACTTCTATGCAATCAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TATCAGTCTATGACAGATTGTACATACAACTGAAAAGTACTAAAGTTATAATTAACAAACTTAAAGTGACAAGG  1702

Query    1  --------------------------------------------------------ATGGAGTCTCGC-TCTGT  17
                                                                    |||||||.|||| |.|||
Sbjct 1703  CTGAATAGTGATCATGAATAAATTGCTACTATAAAAGCACTTTTTTTTTTTTTGAGATGGAGTTTCGCTTTTGT  1776

Query   18  TGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCT  91
            ||||||||||||||||||.||||..|||||||||||||..||||.|||||||||||.||||||||||||||..|
Sbjct 1777  TGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACGTCTGCCTCCCAAGTTCAAGCGATTCTCTT  1850

Query   92  GCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAG  165
            ||||||||||||.|||||||||.||.||.||.||||..||||||||||.||||||||||||||||||.||.|||
Sbjct 1851  GCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAG  1924

Query  166  ACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCACCTCGGCCTCCCAA  239
            ||.||||||..|||||||.|||||||||||||.|||||||||||||||.||||||..||.||||.|||||||||
Sbjct 1925  ACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCGCCCGCCTCAGCCTCCCAA  1998

Query  240  AGTGTTGAGA----------------------------------------------------------------  249
            ||||.|||||                                                                
Sbjct 1999  AGTGCTGAGATTACAGGCATGAGCTACTGCACCCGACCGATAAACGCACATTTTAAACAAATTAGTTTACTAAA  2072

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2073  ACTTCTGAAACAGATCATTAAGCAGGGTTTAAATATGTGTTTATCACTAAAACCAGAAAGGATTGGTTAGAAGT  2146

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2147  GTTATCTGTTGGTTAATAAGGACAAACAGTGGTATAATATTTCTAAACAGAGGAGATTAATGTTGACTCAGGTA  2220

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2221  ATCAAGGAAAGCTTCAGTGGAGGAAGTGTGATTTGAATTGAACCTCAAAGAATGGCAAAGTACTGTATAAAGAA  2294

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2295  CAATAAACCATAAAATATAATAAAGAACTATAAAAGATCTGAGACAGTAATGGCCATCAAACCAATACTACTAT  2368

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2369  TCTGTTTGTTAATTACCAAAGTTTCCATTTCCTGAAGTGTGACTAACCTACTTCCTGAAGTACCCTAACCAAAG  2442

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2443  GTAGATTCAACTTACTATATCTCTGAGCTGGCAAGAAAGCAAAATCCTCACAGGCCAAAAATTAAGTACAAGCA  2516

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2517  GGAAGGCAAGAAGTCAGTAATAGTTGAAGTTGACTGCCTGAGACAGCTCCTCAATCATGTTTGATGACCTTAAA  2590

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2591  CTTCCATTTTGAGGGTACAAGGGACTCTGGGGCTAGAAGACAAAGGCTGGGGCCCAGCCAAGGAGAGGAGGCTG  2664

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2665  ACAGGAGTCCCTTGAACAGAGGACTACACACTATGTAAGAACAGGCTAGGCTAGAAAAACAAAACCCCAAAACC  2738

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2739  TCACCTCTAAAAGATGAAAAAAGGAACTGTCTTTCTCAGTCTTGGTGCTCTTTGGAGGGAGAAAAATCCCCCCT  2812

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2813  CTCCAAATGCATAACTATACATTGCCCTTTCTTGAGTATTCAGAGCCCAAATTTGTGCTCTCTGATGATCTAAA  2886

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2887  AAACTCCTCATGTTGAGAAGTTAAAGTGACTTCAGACTGCAAGTATCTCCCAGAAGACTATCCTGGCTCTAATC  2960

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2961  CAGGCTTATTTCCATTACACTATGTATGTTTTCTCAGTGCCTAGAGTGTGCAGAATTTGTTCCCCAGAGAATTT  3034

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3035  AGTGTGCTGTAGGTGTATTTTGTATTTTGCCAACTAAGGCATATAAGGCCATAAATTATAGAGAAGAATTAGCT  3108

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3109  TTTAAAGTTTATGACCCTTAAAATACCTAATGACCAAAGTTAGTTTTTTAAAAAAGTGAAACAATTCACTCTAA  3182

Query  250  ---------------------------------------  249
                                                   
Sbjct 3183  GGTAGCATATCTTTTTTTTTTTCTTTGAGACAGTCTTAC  3221

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