Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10801
Subject:
XM_005245765.1
Aligned Length:
2516
Identities:
1832
Gaps:
679

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACAACAGAGAAGAGTTTAGTGACTGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGAGGGTGAGGAAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATAAACTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAATTGGTGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AACAGAAGCTGAAAGCTTCTAATGGAGACACTCCTACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAAGCAGAGGACTTTCACGACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGAAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAAGAAGTAGAGTCAGATAAAGAAAAAGGTGAAGGAGGTCAGAAAGAGATAGAATTTGGAACCAGTCTTGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGATCATTTTAAAGGCCCCAATTGCAGCTCCTGAACCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATTAAGCAGTGCAGAAACACAGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATTTTGAAATTAAGGAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAATTAA  592

Query    1  -----------------------------------ATGCACTGCAAGGTTTCTTTGTTGGATGACACAGTTTAT  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGCTTCCCAAAAACCAATCAGAAAACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGATGACACAGTTTAT  666

Query   40  GAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA  740

Query  114  AGAAGACTATTTTGGTCTAGCCATTTGGGATAACGCAACCTCTAAGACATGGCTGGATTCCGCCAAAGAAATAA  187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGAAGACTATTTTGGTCTAGCCATTTGGGATAACGCAACCTCTAAGACATGGCTGGATTCCGCCAAAGAAATAA  814

Query  188  AAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACATTTAATGTAAAGTTTTATCCACCTGACCCAGCACAGTTA  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACATTTAATGTAAAGTTTTATCCACCTGACCCAGCACAGTTA  888

Query  262  ACAGAAGACATAACAAGATATTATTTATGTCTTCAGCTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGTTC  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACAGAAGACATAACAAGATATTATTTATGTCTTCAGCTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGTTC  962

Query  336  CTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGTCTGAACTGGGAGACTACGACCCAGAACTCCATG  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGTCTGAACTGGGAGACTACGACCCAGAACTCCATG  1036

Query  410  GCGTGGATTATGTTAGTGATTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGAAGAGAAGGTCATGGAACTG  483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCGTGGATTATGTTAGTGATTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGAAGAGAAGGTCATGGAACTG  1110

Query  484  CATAAGTCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTTTCTTGAGAATGCCAAAAAGTTGTCTAT  557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CATAAGTCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTTTCTTGAGAATGCCAAAAAGTTGTCTAT  1184

Query  558  GTATGGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCTCTAGTGGCC  631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTATGGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCTCTAGTGGCC  1258

Query  632  TTCTGGTTTACAAAGATAAGCTGAGAATTAACCGCTTCCCTTGGCCCAAAGTGCTGAAGATTTCTTATAAACGT  705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTCTGGTTTACAAAGATAAGCTGAGAATTAACCGCTTCCCTTGGCCCAAAGTGCTGAAGATTTCTTATAAACGT  1332

Query  706  AGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTCAAACTTCCCAG  779
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTCAAACTTCCCAG  1406

Query  780  TTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAACATCACACGTTTTTCAGATTGACATCTACAGACA  853
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAACATCACACGTTTTTCAGATTGACATCTACAGACA  1480

Query  854  CCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGGCCGGACTCAAGCTCAGACCAGG  927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGGCCGGACTCAAGCTCAGACCAGG  1554

Query  928  CAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCT  1001
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCT  1628

Query 1002  CGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTC  1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTC  1702

Query 1076  AGGTTGCAGAAGGTGGCGTCCTAGATGCCTCTGCTAAAAAAACAGTGGTCCCTAAAGCACAGAAGGAAACAGTG  1149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGGTTGCAGAAGGTGGCGTCCTAGATGCCTCTGCTAAAAAAACAGTGGTCCCTAAAGCACAGAAGGAAACAGTG  1776

Query 1150  AAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAA----GA  1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||
Sbjct 1777  AAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTGGA  1850

Query 1220  AAAA---------GA-GAGAAAG-AC------TAGATGGTGA--AAACATTTATATCAGACATAGCAATTTAAT  1274
            ||||         || |.||.|| ||      .|.|||||||  |||||                         
Sbjct 1851  AAAAACCCACATCGAGGTGACAGTACCCACCTCAAATGGTGACCAAACA-------------------------  1899

Query 1275  GTTGGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGAACT  1348
                .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900  ----CAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGAACT  1969

Query 1349  TCATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACT  1422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1970  TCATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACT  2043

Query 1423  CTTAACATCAATGGGCAAATCCCCACAGGAGAAGGACCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGA  1496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2044  CTTAACATCAATGGGCAAATCCCCACAGGAGAAGGACCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGA  2117

Query 1497  TAATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCA  1570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2118  TAATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCA  2191

Query 1571  CTTATGAGGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATC  1644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2192  CTTATGAGGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATC  2265

Query 1645  ACATCTGAGACCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACG  1718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2266  ACATCTGAGACCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACG  2339

Query 1719  TATTGAAAAGAGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGG  1792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340  TATTGAAAAGAGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGG  2413

Query 1793  AGGCAAAGGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  1866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2414  AGGCAAAGGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  2487

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