Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10803
- Subject:
- NM_004440.4
- Aligned Length:
- 2994
- Identities:
- 836
- Gaps:
- 2157
Alignment
Query 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
Query 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
Query 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
Query 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
Query 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
Query 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATGTAAGAGAAAACCTCTATGTAAAAATAGACACC 444
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATATAAGAGAAAACCTCTATGTAAAAATAGACACC 444
Query 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
Query 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
Query 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
Query 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
Query 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
Query 815 AAGGAGACACTTGTGAA---TGT---------------AAG--------------------------------- 837
||||||||||||||||| ||| |||
Sbjct 815 AAGGAGACACTTGTGAACCCTGTGGCCGTGGGTTCTACAAGTCTTCCTCTCAAGATCTTCAGTGCTCTCGTTGT 888
Query 838 -------------------------------------------------------------------------- 837
Sbjct 889 CCAACTCACAGTTTTTCTGATAAAGAAGGCTCCTCCAGATGTGAATGTGAAGATGGGTATTACAGGGCTCCATC 962
Query 838 -------------------------------------------------------------------------- 837
Sbjct 963 TGACCCACCATACGTTGCGTGCACAAGGCCTCCATCTGCACCACAGAACCTCATTTTCAACATCAACCAAACCA 1036
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1037 CAGTAAGTTTGGAATGGAGTCCTCCTGCAGACAATGGGGGAAGAAACGATGTGACCTACAGAATATTGTGTAAG 1110
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1111 CGGTGCAGTTGGGAGCAGGGCGAATGTGTTCCCTGTGGGAGTAACATTGGATACATGCCCCAGCAGACTGGATT 1184
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1185 AGAGGATAACTATGTCACTGTCATGGACCTGCTAGCCCACGCTAATTATACTTTTGAAGTTGAAGCTGTAAATG 1258
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1259 GAGTTTCTGACTTAAGCCGATCCCAGAGGCTCTTTGCTGCTGTCAGTATCACCACTGGTCAAGCAGCTCCCTCG 1332
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1333 CAAGTGAGTGGAGTAATGAAGGAGAGAGTACTGCAGCGGAGTGTCGAGCTTTCCTGGCAGGAACCAGAGCATCC 1406
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1407 CAATGGAGTCATCACAGAATATGAAATCAAGTATTACGAGAAAGATCAAAGGGAACGGACCTACTCAACAGTAA 1480
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1481 AAACCAAGTCTACTTCAGCCTCCATTAATAATCTGAAACCAGGAACAGTGTATGTTTTCCAGATTCGGGCTTTT 1554
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1555 ACTGCTGCTGGTTATGGAAATTACAGTCCCAGACTTGATGTTGCTACACTAGAGGAAGCTACAGGTAAAATGTT 1628
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1629 TGAAGCTACAGCTGTCTCCAGTGAACAGAATCCTGTTATTATCATTGCTGTGGTTGCTGTAGCTGGGACCATCA 1702
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1703 TTTTGGTGTTCATGGTCTTTGGCTTCATCATTGGGAGAAGGCACTGTGGTTATAGCAAAGCTGACCAAGAAGGC 1776
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1777 GATGAAGAGCTTTACTTTCATTTTAAATTTCCAGGCACCAAAACCTACATTGACCCTGAAACCTATGAGGACCC 1850
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1851 AAATAGAGCTGTCCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTGGTGCAG 1924
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1925 GAGAATTCGGTGAAGTCTGCAGTGGCCGTTTGAAACTTCCAGGGAAAAGAGATGTTGCAGTAGCCATAAAAACC 1998
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1999 CTGAAAGTTGGTTACACAGAAAAACAAAGGAGAGACTTTTTGTGTGAAGCAAGCATCATGGGGCAGTTTGACCA 2072
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2073 CCCGAATGTTGTCCATTTGGAAGGGGTTGTTACAAGAGGGAAACCAGTCATGATAGTAATAGAGTTCATGGAAA 2146
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2147 ATGGAGCCCTAGATGCATTTCTCAGGAAACATGATGGGCAATTTACAGTCATTCAGTTAGTAGGAATGCTGAGA 2220
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2221 GGAATTGCTGCTGGAATGAGATATTTGGCTGATATGGGATATGTTCACAGGGACCTTGCAGCTCGCAATATTCT 2294
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2295 TGTCAACAGCAATCTCGTTTGTAAAGTGTCAGATTTTGGCCTGTCCCGAGTTATAGAGGATGATCCAGAAGCTG 2368
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2369 TCTATACAACTACTGGTGGAAAAATTCCAGTAAGGTGGACAGCACCCGAAGCCATCCAGTACCGGAAATTCACA 2442
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2443 TCAGCCAGTGATGTATGGAGCTATGGAATAGTCATGTGGGAAGTTATGTCTTATGGAGAAAGACCTTATTGGGA 2516
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2517 CATGTCAAATCAAGATGTTATAAAAGCAATAGAAGAAGGTTATCGTTTACCAGCACCCATGGACTGCCCAGCTG 2590
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2591 GCCTTCACCAGCTAATGTTGGATTGTTGGCAAAAGGAGCGTGCTGAAAGGCCAAAATTTGAACAGATAGTTGGA 2664
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2665 ATTCTAGACAAAATGATTCGAAACCCAAATAGTCTGAAAACTCCCCTGGGAACTTGTAGTAGGCCAATAAGCCC 2738
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2739 TCTTCTGGATCAAAACACTCCTGATTTCACTACCTTTTGTTCAGTTGGAGAATGGCTACAAGCTATTAAGATGG 2812
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2813 AAAGATATAAAGATAATTTCACGGCAGCTGGCTACAATTCCCTTGAATCAGTAGCCAGGATGACTATTGAGGAT 2886
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2887 GTGATGAGTTTAGGGATCACACTGGTTGGTCATCAAAAGAAAATCATGAGCAGCATTCAGACTATGAGAGCACA 2960
Query 838 ---------------------------------- 837
Sbjct 2961 AATGCTACATTTACATGGAACTGGCATTCAAGTG 2994
