Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10803
- Subject:
- NM_010141.4
- Aligned Length:
- 2996
- Identities:
- 778
- Gaps:
- 2161
Alignment
Query 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
||||||.||||||||||||.||||||.|||||||||||.||.||||||||||||||..|||||||||||||.||
Sbjct 1 ATGGTTGTTCAAACTCGGTTCCCTTCGTGGATTATTTTGTGTTACATCTGGCTGCTTGGCTTTGCACACACGGG 74
Query 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
||||||||||||||||||||||||||||.|.|||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 75 GGAGGCGCAGGCTGCGAAGGAAGTACTATTACTGGACTCGAAAGCACAACAAACAGAATTGGAATGGATTTCCT 148
Query 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
|||||||||.||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||||
Sbjct 149 CTCCACCCAGTGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTACACTCCGATAAGAACATACCAGGTGTGC 222
Query 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 223 CAGGTCATGGAGCCCAACCAGAACAACTGGCTGCGGACTAACTGGATTTCTAAAGGCAACGCACAAAGGATTTT 296
Query 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
|||||||||||||||||||.|||||||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct 297 TGTAGAATTGAAATTCACCTTGAGGGATTGTAATAGTCTTCCCGGAGTCCTGGGAACTTGCAAGGAAACGTTTA 370
Query 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATGTAAGAGAAAACCTCTATGTAAAAATAGACACC 444
|||||||||||||||||||||||||.|||||.|||||||||.||.||||||||||.|||||.||||||||||||
Sbjct 371 ATTTGTACTATTATGAAACAGACTACGACACCGGCAGGAATATACGAGAAAACCTTTATGTTAAAATAGACACC 444
Query 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 445 ATTGCTGCAGATGAAAGTTTCACACAAGGTGACCTTGGTGAAAGAAAGATGAAGCTGAACACTGAGGTGAGAGA 518
Query 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCATTGGTTTCTG 592
Query 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.
Sbjct 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTGTTGAGAACTTAGCTGTCTTTCCAGATACAGTGACTGGTTCG 666
Query 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
|||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||.||.|||||..|||||||
Sbjct 667 GAATTTTCCTCCTTAGTCGAGGTCCGTGGGACATGTGTCAGCAGTGCCGAGGAAGAGGCAGAAAATTCCCCCAG 740
Query 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
.|||||.|||||||||||||||||.|||.||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 AATGCATTGCAGTGCAGAAGGAGAGTGGCTAGTACCCATTGGAAAATGCATCTGCAAAGCAGGCTATCAGCAAA 814
Query 815 AAGGAGACACTTGTGAA---TGTAAG------------------------------------------------ 837
||||.||||||||.||| ||| |
Sbjct 815 AAGGGGACACTTGCGAACCCTGT--GGCCGCAGGTTCTACAAATCTTCCTCTCAGGATCTCCAGTGTTCTCGTT 886
Query 838 -------------------------------------------------------------------------- 837
Sbjct 887 GTCCAACCCACAGCTTCTCTGACCGAGAAGGATCATCCAGGTGTGAATGTGAAGATGGGTACTACAGAGCTCCT 960
Query 838 -------------------------------------------------------------------------- 837
Sbjct 961 TCTGATCCACCATACGTTGCATGCACGAGGCCTCCCTCTGCACCACAGAACCTTATTTTCAATATCAATCAAAC 1034
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1035 GACTGTAAGTTTGGAATGGAGTCCTCCGGCTGACAACGGGGGAAGAAACGATGTCACCTACAGAATACTGTGTA 1108
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1109 AGCGGTGCAGTTGGGAACAGGGAGAATGTGTGCCATGCGGAAGTAACATTGGATACATGCCCCAGCAGACGGGA 1182
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1183 TTAGAGGATAACTATGTCACTGTCATGGACCTACTTGCCCATGCAAATTACACTTTCGAAGTTGAAGCTGTAAA 1256
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1257 TGGAGTTTCGGACTTAAGCAGATCCCAGAGGCTCTTCGCTGCTGTTAGCATCACCACCGGTCAAGCAGCTCCCT 1330
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1331 CGCAAGTGAGTGGAGTCATGAAGGAGCGAGTACTGCAGCGGAGTGTGCAGCTTTCCTGGCAGGAGCCGGAGCAT 1404
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1405 CCCAATGGAGTCATCACGGAATATGAAATCAAGTATTATGAGAAAGATCAACGGGAAAGGACGTACTCAACACT 1478
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1479 CAAAACCAAGTCCACCTCCGCCTCCATTAATAATCTGAAACCGGGAACAGTGTACGTCTTTCAGATCCGGGCGG 1552
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1553 TCACTGCTGCCGGTTATGGAAACTACAGCCCTAGGCTTGATGTTGCCACACTTGAGGAAGCTTCAGGTAAAATG 1626
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1627 TTTGAAGCGACAGCAGTCTCCAGTGAACAGAATCCTGTCATCATAATTGCTGTAGTGGCTGTAGCAGGGACCAT 1700
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1701 CATCTTGGTGTTCATGGTGTTCGGCTTCATCATTGGAAGAAGGCACTGTGGTTATAGCAAGGCTGACCAAGAAG 1774
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1775 GGGATGAAGAACTCTACTTTCATTTTAAATTTCCAGGCACCAAAACCTACATTGACCCTGAAACCTATGAGGAC 1848
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1849 CCAAATAGAGCTGTCCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTGGTGC 1922
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1923 AGGAGAATTTGGAGAAGTTTGCAGTGGTCGTTTGAAACTTCCGGGGAAGAGAGATGTTGCAGTGGCCATAAAAA 1996
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1997 CCCTGAAAGTTGGTTACACAGAAAAGCAAAGGAGGGACTTTTTATGCGAAGCAAGCATCATGGGGCAATTTGAC 2070
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2071 CACCCAAATGTCGTCCATTTGGAAGGGGTTGTTACAAGAGGGAAGCCTGTCATGATTGTGATAGAGTTCATGGA 2144
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2145 GAATGGAGCCCTGGATGCATTTCTCAGGAAACACGATGGGCAGTTTACAGTCATTCAGTTGGTAGGAATGTTGA 2218
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2219 GAGGTATTGCCGCTGGGATGCGATACTTGGCTGATATGGGATACGTTCACAGGGACCTTGCAGCGCGCAACATC 2292
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2293 CTTGTCAACAGCAATCTTGTTTGTAAAGTGTCAGATTTTGGCCTTTCCCGGGTTATAGAGGATGATCCCGAAGC 2366
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2367 TGTCTACACCACGACTGGTGGAAAAATTCCAGTAAGGTGGACTGCACCGGAAGCCATTCAATACCGGAAGTTCA 2440
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2441 CCTCAGCCAGCGATGTGTGGAGCTATGGGATTGTCATGTGGGAAGTGATGTCTTATGGAGAAAGACCTTACTGG 2514
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2515 GACATGTCAAATCAAGATGTCATTAAAGCGATAGAAGAAGGTTATCGTTTGCCGGCGCCCATGGATTGCCCAGC 2588
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2589 TGGTCTTCACCAGCTAATGCTGGATTGTTGGCAGAAAGATCGGGCGGAAAGGCCAAAGTTTGAGCAGATAGTCG 2662
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2663 GAATTCTAGACAAAATGATTCGAAACCCAAGTAGTCTGAAAACACCCCTGGGAACTTGTAGTAGACCCTTAAGC 2736
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2737 CCTCTTCTGGACCAGAGCACTCCTGACTTCACTGCCTTCTGTTCAGTTGGAGAATGGTTGCAAGCTATTAAAAT 2810
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2811 GGAAAGGTATAAGGACAACTTCACAGCAGCGGGTTACAACTCACTCGAGTCAGTGGCCAGGATGACTATCGATG 2884
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2885 ATGTGATGAGTTTAGGGATCACACTGGTTGGCCATCAAAAGAAGATCATGAGCAGCATCCAGACTATGCGGGCA 2958
Query 838 ------------------------------------ 837
Sbjct 2959 CAAATGTTGCATTTACACGGAACAGGCATCCAAGTG 2994
