Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10806
- Subject:
- NM_010153.1
- Aligned Length:
- 4017
- Identities:
- 868
- Gaps:
- 3024
Alignment
Query 1 ATGAGGGCGAACGACGCTCTGCAGGTGCTGGGCTTGCTTTTCAGCCTGGCCCGGGGCTCCGAGGTGGGCAACTC 74
|||||.||||..|...||||||||||||||||.||.|||.||||||||||||||||.||||||.||||||||||
Sbjct 1 ATGAGTGCGATTGGGACTCTGCAGGTGCTGGGTTTCCTTCTCAGCCTGGCCCGGGGTTCCGAGATGGGCAACTC 74
Query 75 TCAGGCAGTGTGTCCTGGGACTCTGAATGGCCTGAGTGTGACCGGCGATGCTGAGAACCAATACCAGACACTGT 148
|||||||||.||||||||||||||.||.||.|||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 75 TCAGGCAGTATGTCCTGGGACTCTAAACGGGCTGAGTGTGACCGGCGATGCTGACAACCAGTACCAGACACTGT 148
Query 149 ACAAGCTCTACGAGAGGTGTGAGGTGGTGATGGGGAACCTTGAGATTGTGCTCACGGGACACAATGCCGACCTC 222
||||.|||||.||||.||||||||||||.|||||.|||||.|||||||||||.||||||||||||||.||.||.
Sbjct 149 ACAAACTCTATGAGAAGTGTGAGGTGGTCATGGGTAACCTGGAGATTGTGCTTACGGGACACAATGCTGATCTT 222
Query 223 TCCTTCCTGCAGTGGATTCGAGAAGTGACAGGCTATGTCCTCGTGGCCATGAATGAATTCTCTACTCTACCATT 296
|||||||||||.|||||.||||||||||||||||||||.||.|||||||||||||||||||||...||.||.||
Sbjct 223 TCCTTCCTGCAATGGATCCGAGAAGTGACAGGCTATGTACTGGTGGCCATGAATGAATTCTCTGTACTGCCCTT 296
Query 297 GCCCAACCTCCGCGTGGTGCGAGGGACCCAGGTCTACGATGGGAAGTTTGCCATCTTCGTCATGTTGAACTATA 370
.||.||||||||.|||||.||.||.||||||||||||||||||||||||||||||||.||||||||||||||.|
Sbjct 297 ACCTAACCTCCGAGTGGTCCGGGGAACCCAGGTCTACGATGGGAAGTTTGCCATCTTTGTCATGTTGAACTACA 370
Query 371 ACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCTTGACTCAGCTCACCGAGATTCTGTCAGGGGGTGTTTAT 444
|.||||||||||||||.|||||||||||||||||.||.||||||||.||.||||||||||.||||||.|||||.
Sbjct 371 ATACCAACTCCAGCCATGCTCTGCGCCAGCTCCGGTTCACTCAGCTTACTGAGATTCTGTTAGGGGGCGTTTAC 444
Query 445 ATTGAGAAGAACGATAAGCTTTGTCACATGGACACAATTGACTGGAGGGACATCGTGAGGGACCGAGATGCTGA 518
|||||||||||.||.||.|||||.||||||||.||||||||||||||||||||||||||||..|.|||.|||||
Sbjct 445 ATTGAGAAGAATGACAAACTTTGCCACATGGATACAATTGACTGGAGGGACATCGTGAGGGTTCCAGACGCTGA 518
Query 519 GATAGTGGTGAAGGACAATGGCAGAAGCTGTCCCCCCTGTCATGAGGTTTGCAAGGGGCGATGCTGGGGTCCTG 592
|||||||||||||.||||.||..|.|.||||||.||||||||.||.||.||||||||||||||||||||.||||
Sbjct 519 GATAGTGGTGAAGAACAACGGGGGGAACTGTCCACCCTGTCACGAAGTCTGCAAGGGGCGATGCTGGGGGCCTG 592
Query 593 GATCAGAAGACTGCCAGACATTGACCAAGACCATCTGTGCTCCTCAGTGTAATGGTCACTGCTTTGGGCCCAAC 666
||.|||||||||||||||.|||||||||||||||||||||.|||||||||||.||||.||||||.||||||||.
Sbjct 593 GACCAGAAGACTGCCAGATATTGACCAAGACCATCTGTGCCCCTCAGTGTAACGGTCGCTGCTTCGGGCCCAAT 666
Query 667 CCCAACCAGTGCTGCCATGATGAGTGTGCCGGGGGCTGCTCAGGCCCTCAGGACACAGACTGCTTTGCCTGCCG 740
||.||||||||||||||.|||||.|||||.||.||||||||.||.||.|||||||||||.|||||.||||||||
Sbjct 667 CCTAACCAGTGCTGCCACGATGAATGTGCAGGTGGCTGCTCTGGACCCCAGGACACAGATTGCTTCGCCTGCCG 740
Query 741 GCACTTCAATGACAGTGGAGCCTGTGTACCTCGCTGTCCACAGCCTCTTGTCTACAACAAGCTAACTTTCCAGC 814
.|||||||||||||||||.||||||||.||..|.||||||..|||.|||||.||||||||||||||.|||||||
Sbjct 741 ACACTTCAATGACAGTGGTGCCTGTGTGCCCAGGTGTCCAGCGCCCCTTGTGTACAACAAGCTAACGTTCCAGC 814
Query 815 TGGAACCCAATCCCCACACCAAGTATCAGTATGGAGGAGTTTGTGTAGCCAGCTGTCCCCATAACTTTGTGGTG 888
|.||.|||||.|||||.|.||||||||||||.||||||||.|||||.|||||.|||||||||||||||||||||
Sbjct 815 TTGAGCCCAACCCCCATATCAAGTATCAGTACGGAGGAGTCTGTGTTGCCAGTTGTCCCCATAACTTTGTGGTG 888
Query 889 GATCAAACATCCTGTGTCAGGGCCTGTCCTCCTGACAAGATGGAAGTAGATAAAAATGGGCTCAAGATGTGTGA 962
|||||.||||..|||||||||||.||||||.||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 889 GATCAGACATTTTGTGTCAGGGCTTGTCCTGCTGACAAGATGGAAGTAGATAAGAATGGACTCAAGATGTGTGA 962
Query 963 GCCTTGTGGGGGACTATGTCCCAAAGCCTTT------------------------------------------- 993
||||||..|.||.||.||.||.|||||||.|
Sbjct 963 GCCTTGCAGAGGGCTGTGCCCAAAAGCCTGTGAGGGGACGGGCTCTGGAAGCCGCTACCAGACCGTGGACTCTA 1036
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1037 GCAATATCGATGGGTTCGTGAACTGTACCAAGATCCTGGGCAACCTGGACTTCCTCATCACTGGCCTCAATGGT 1110
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1111 GACCCCTGGCACAAGATCCCTGCACTGGACCCGGAAAAGCTCAATGTTTTCAGGACAGTCCGGGAGATTACAGG 1184
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1185 CTACCTAAACATCCAGTCCTGGCCCCCTCACATGCACAACTTCAGTGTTTTTTCCAACCTGACGACCATCGGGG 1258
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1259 GCAGAAGCCTCTACAATCGGGGCTTCTCCTTGTTGATCATGAAGAACTTGAATGTCACGTCTCTGGGCTTCCGG 1332
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1333 TCCCTGAAGGAAATTAGTGCTGGGCGTGTCTACATAAGTGCCAATCAGCAACTTTGTTACCACCACTCTCTGAA 1406
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1407 CTGGACCAGACTTCTGCGGGGGCCCGCAGAGGAGAGACTTGACATCAAGTACAACCGGCCTCTGGGAGAATGCG 1480
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1481 TGGCAGAGGGCAAAGTGTGTGATCCACTGTGCTCCTCTGGGGGATGCTGGGGCCCAGGCCCTGGTCAGTGCTTG 1554
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1555 TCTTGTCGAAACTACAGCCGGGAAGGTGTCTGTGTGACTCACTGCAACGTTCTGCAAGGGGAACCCCGAGAGTT 1628
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1629 TGTTCATGAGGCTCATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCT 1702
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1703 CGGGCTCCGACGCTTGTGCTCGATGCGCCCATTTTCGTGATGGGCCCCACTGTGTGAACAGCTGCCCCCATGGA 1776
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1777 ATCCTAGGTGCCAAAGGTCCAATCTACAAATATCCAGATGCTCAGAATGAGTGCCGGCCCTGCCACGAGAACTG 1850
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1851 CACCCAAGGGTGTAAGGGACCAGAACTACAAGACTGTTTAGGCCAAGCAGAGGTATTAATGAGCAAACCACACC 1924
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1925 TGGTCATAGCGGTGACAGTAGGACTGACTGTGATCTTCCTGATTCTGGGAGGCTCTTTTCTCTATTGGCGTGGA 1998
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1999 CGCAGGATTCAGAATAAAAGGGCTATGAGACGCTACTTGGAGCGGGGTGAGAGCATCGAGCCTCTGGACCCAAG 2072
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2073 CGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACAGAGCTGAGGAAACTTAAGGTGCTTGGCTCTG 2146
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2147 GTGTCTTTGGAACTGTACACAAGGGGATTTGGATTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCATTAAA 2220
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2221 GTCATCGAGGACAAGAGTGGGCGGCAGAGTTTTCAGGCTGTGACTGATCACATGCTGGCCGTCGGCAGCCTGGA 2294
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2295 CCATGCCCACATTGTACGGCTGCTGGGACTGTGCCCAGGGTCATCTCTGCAGCTTGTCACTCAGTACTTGCCTC 2368
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2369 TGGGCTCTCTCCTTGATCATGTAAGACAGCACCGTGAGACACTGGGACCACAGCTGCTGCTCAACTGGGGAGTA 2442
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2443 CAAATTGCCAAGGGTATGTATTACCTCGAGGAACACAGCATGGTGCATAGGGACCTTGCGCTCCGGAATGTGAT 2516
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2517 GCTTAAGTCACCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCTGACTTGCTGCCGCCAGATGACAAGCAGT 2590
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2591 TACTACACAGTGAGGCCAAGACTCCAATTAAATGGATGGCCCTTGAGAGTATCCACTTTGGGAAATACACACAC 2664
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2665 CAGAGTGATGTCTGGAGTTACGGTGTAACCGTTTGGGAGTTGATGACCTTCGGGGCAGAGCCCTACGCAGGGCT 2738
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2739 ACGACTGGCTGAAATACCAGACCTGCTGGAGAAGGGAGAGCGGTTAGCACAGCCCCAGATCTGCACCATTGACG 2812
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2813 TCTACATGGTCATGGTCAAGTGTTGGATGATTGACGAGAATATTCGCCCAACCTTTAAAGAACTGGCCAATGAG 2886
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2887 TTTACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTCATCAAGAGAGCGAGTGGGCCTGGAATACCTCCTGC 2960
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2961 AGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCAGACCTGGACCTCGACCTAG 3034
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3035 ACGTGGAGGTAGAAGAGGAGGGCCTGGCGACCACACTGGGTTCTGCCCTCAGCTTGCCTACAGGAACGCTTACC 3108
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3109 CGGCCACGTGGGAGCCAGAGTCTTTTAAGTCCTTCGTCTGGATACATGCCCATGAACCAGAGCAACCTTGGGGA 3182
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3183 GGCTTGTCTGGATTCTGCGGTTTTGGGGGGTCGCGAACAGTTCTCCCGTCCCATCTCTCTGCACCCGATCCCAC 3256
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3257 GGGGGCGTCAAACGTCAGAGTCATCAGAGGGCCATGTGACGGGCTCTGAGGCTGAACTCCAAGAGAGAGTATCA 3330
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3331 ATGTGTAGGAGCCGGAGCCGGAGCCGGAGCCCACGGCCACGTGGGGACAGTGCCTACCATTCGCAGCGACACAG 3404
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3405 CCTGCTTACTCCCGTCACCCCGCTCTCCCCACCAGGGTTAGAGGAAGAGGATGGCAATGGTTATGTCATGCCAG 3478
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3479 ATACGCACCTCAGAGGTACATCCTCTTCCCGGGAAGGCACCCTTTCGTCAGTAGGTCTCAGTTCTGTGCTGGGT 3552
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3553 ACCGAAGAGGAAGATGAAGATGAGGAGTATGAATACATGAACCGGAAGAGGAGGGGTAGCCCGGCTCGGCCCCC 3626
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3627 CAGACCTGGTTCCCTGGAAGAGCTGGGCTATGAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCA 3700
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3701 GTACGCAGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCTCTGCTGGCACGACTCCAGATGAGGACTATGAA 3774
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3775 TACATGAACCGCAGGCGTGGTGCGGGCGGTTCCGGAGGGGATTATGCAGCTATGGGGGCCTGCCCAGCAGCTGA 3848
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3849 ACAAGGGTATGAGGAAATGCGAGCTTTCCAGGGGCCTGGACATCAAGCCCCCCATGTTCGTTATGCCCGCCTCA 3922
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3923 AAACTCTGCGTAGTTTAGAAGCCACTGACTCCGCCTTTGACAACCCCGATTACTGGCATAGCAGGCTTTTCCCT 3996
Query 994 --------------------- 993
Sbjct 3997 AAGGCTAACGCCCAGAGAATT 4017
