Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10838
Subject:
NM_001330608.1
Aligned Length:
939
Identities:
223
Gaps:
687

Alignment

Query   1  ATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGGCCTGGCCTCTCTGATATGCATCAGTATAGCCAATGGCT  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  AGCCAGCAGACATGAAGCTAATTTGCTACCAATGAAAGAAGATCTGGCCTTGTGGTTAACCAATCTATTAGGGA  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  AGGAGATTACAGCAGAAACTTTTATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATG  222
                                  ||||||||||||||.||||||||||||||||||||.|||||||.||||.||
Sbjct   1  -----------------------ATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGTG  51

Query 223  CAGGAGAAATTCAAGGAGAGCATGGATGCTAACAAGCCCACAAAGAATCTACCGTTGAAGAAGATCCCATGCAA  296
           ||||||||||||||.|||||.||||||||.||||||||..|.||||..|||||..||||||||||.||.|||||
Sbjct  52  CAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCCTTGCAA  125

Query 297  AACCAGTGCACCCTCGGGCTCCTTTTTTGCCAGAGACAATACAGCAAATTTCTTATCCTGGTGCCGAGATTTAG  370
           |.|||||||||||||||||||||||||||||.|||||||.|||||.||||||.|||||||||||||||||||.|
Sbjct 126  AGCCAGTGCACCCTCGGGCTCCTTTTTTGCCCGAGACAACACAGCCAATTTCCTATCCTGGTGCCGAGATTTGG  199

Query 371  GGGTGGATGAAACGTGTCTATTTGAATCGGAAGGTTTGG------------------GA--------------T  412
           |.||.||||||||.|||||.||||||||.|||||..|||                  ||              |
Sbjct 200  GAGTTGATGAAACATGTCTTTTTGAATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGAAGTGTGTCTCTGT  273

Query 413  TTG---GAG---------------GCCAG---------------------------------------------  423
           |||   |||               |||||                                             
Sbjct 274  TTGCTAGAGCTTGGTCGGATTGCAGCCAGGTATGGTGTGGAGCCTCCTGGTCTGATAAAGCTGGAAAAAGAAAT  347

Query 424  --------------------------------------------------------------------------  423
                                                                                     
Sbjct 348  TGAACAAGAAGAGACACTTTCTGCCCCATCTCCTTCGCCTTCTCCTTCATCAAAGTCTTCAGGAAAGAAGAGTA  421

Query 424  --------------------------------------------------------------------------  423
                                                                                     
Sbjct 422  CTGGAAACTTACTGGATGATGCAGTAAAAAGAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGT  495

Query 424  --------------------------------------------------------------------------  423
                                                                                     
Sbjct 496  GTGGAGCGGCTCTCTCAAGGTCGATACCGAGTGGGAGAGAAGATCCTCTTCATCAGGATGCTGCACAACAAGCA  569

Query 424  --------------------------------------------------------------------------  423
                                                                                     
Sbjct 570  TGTGATGGTCCGAGTGGGAGGAGGCTGGGAGACCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCCGCATGC  643

Query 424  --------------------------------------------------------------------------  423
                                                                                     
Sbjct 644  TGCAGATCTCCCGTGTGGACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATGAATCCT  717

Query 424  ---------------------------------------------------  423
                                                              
Sbjct 718  GATAATTACCTGGTGGTCTCTGCCACCTACAAGGCTAAGAAGGAGATTAAA  768