Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10854
- Subject:
- XM_005265072.3
- Aligned Length:
- 6810
- Identities:
- 491
- Gaps:
- 6315
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAG-------------------------------------------------------------- 160
||||||||||||
Sbjct 149 CACCCAATAGAGAGCTACTAGCCGGGATGATAGCAGAGCCTGCTTTTCTCTCTGAGTATACTATCTTTGCTTTG 222
Query 161 -------------------------------------------------------------------------- 160
Sbjct 223 GATTCCTCCAAACATCCTAAAACACAGAGTGACAGTGTGAATGCATCTACTCATGCCTCGAAATCTCCTGACAG 296
Query 161 -----------------------------AGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 205
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTTAATGGAAGTGAACCAAGCATTCCTCAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 370
Query 206 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 444
Query 280 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 518
Query 354 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 592
Query 428 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAG------TCATGGCTCCGA-TC--- 491
|||||||||||||||||||||||||||||||||||||||||||||||||| |.|.| ||.|| ||
Sbjct 593 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAGGGTATATTAAG--TCAGAGTCAGG 664
Query 492 ----TTCATCT--------------------------------------------------------------- 498
.||| ||
Sbjct 665 ATAAATCA-CTTCGGAGAATAGCAGAATTAAGAGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCA 737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 738 AGAGGAGTTTGATGCATCTTTAGAGGAGAAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGA 811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 812 AACAACGATTACGAAATGGCCCGATGAATGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAA 885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 886 GTCTTCACTAAAGAAGAGAATCCAGAAAGTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACT 959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 960 GGAAACACTCCAGCAAAGAGTGAAGCGTCAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATA 1033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1034 AGGAACAATGTACACTATTAACTAGTGAAAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTA 1107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1108 GAAAAGATAAAGGACCTTCATATGGCCGAGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAAT 1181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1182 TGAACAGCTTGAACAAGATAAGGGAATGGTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGA 1255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1256 AAGAAGAAGAAATTGCTCAACTCCGTAGTCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAG 1329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1330 AAAGAAAAGTCCGAAAGAGCTGCTTTTGAGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGC 1403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1404 ACGGAGAAAACTGAAGGCAGAAATGGATGAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCA 1477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1478 GTCTTCAACAGGAATTAAGTCGGGTGAAACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATT 1551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1552 GCTAAGCTACAGAAGCTTCATGAAAAGGAGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCG 1625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1626 AGAAAGGGAATTTCAGGAACAAATGAAAGTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAG 1699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1700 AAAAAGAACAGCAAGAATCTTTGGCCCTAGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAA 1773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1774 AATAAACTTCGGGACCTTCAGCAAGAAGCAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGA 1847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1848 AAAAAGCTTACAAGAAAACAAAAATCAGTCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACA 1921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1922 ATAAGGAGATTACAGTCATGGTTGAAAAACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTT 1995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1996 TGGACTGAAAAACTCCAAGTCTTAAAGCAACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACA 2069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2070 AGAAAAAGAAACATTGTTGAAAGACAAAGAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTT 2143
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2144 TAGAAAAGCTTGATGTGAAGCAAACAGAACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGT 2217
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2218 CACAAACTAGAAGAGGAACTTTCTGTTCTGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGAT 2291
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2292 GGATGAACAGAAAAATCATCACCAGCAGCAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGA 2365
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2366 CTGAGAAGGCATTAAAAGATCAAATTAATCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAG 2439
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2440 CATCAGGCTCATGTAGAAAATTTAGAGGCAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAA 2513
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2514 GCTGGACGTTTTTCAGTCTTACCAGAGTGCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAAT 2587
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2588 TGCAGCAGAAGTTGTTGGATTTGGAAACAGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAA 2661
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2662 AAGAAAGATGTTTGTACTGAGTTAGATGCTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACA 2735
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2736 AAATAGTGAAATGGAGCAAAAAGTAAAATCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAG 2809
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2810 AACAGGAACAGACAAAGCAAATCTTGGTGGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAA 2883
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2884 GAAATTGAGATACTCACACAGAAATTGTCAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAAC 2957
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2958 CAAATTTAAAAACCAAGAAAAAAAGATGGAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGA 3031
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3032 AAAAATTACTGGATCAGGAAGCCAAACTTAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAA 3105
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3106 AAACAGTTTAATGCCAAAATGCTGGAAATGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACT 3179
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3180 GGAAACAAACCAAAAAGAACAAATAGAAAGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAA 3253
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3254 TCTGGGAAAAGAAACTTAATCAGCAAGCTGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAA 3327
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3328 CAAGAGGTAGCAGAACTGAAACAAAAGATCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAAC 3401
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3402 ATGGCTGAAGGAAGAAGGTGTTAAGCAGGATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTG 3475
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3476 CCCATGTGAATTCTCTTGCACAAGATGAAACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAAT 3549
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3550 AAGTCTCTGAAGGAAAATACTTTTCTTCAAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCG 3623
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3624 GAAGGTTTCTGAGTTGACTAGCAAGTTGAAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAA 3697
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3698 AAAGTAACAAAAGCCTAGAGGACAAGAGCTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGAT 3771
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3772 ATTTGCTGTAAGAAAACCGAAGCCTTATTAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAAC 3845
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3846 TAATGCCATTCTTTCTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAA 3919
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3920 CTTGCACAGTTTCTGAATTAGAAGCACAACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTT 3993
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3994 CAACAGGCTACTCATCAGTTAGAAGAAAAAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGT 4067
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4068 AACAGAAAAAGAAGCCTTACAGAAGGAAGGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAA 4141
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4142 CACAGTTGAAGAAAGAGTTATCTGAAAACATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAA 4215
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4216 GTTGAGATTAGCAGTCTTAGTAAACAACTAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGA 4289
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4290 AAAAGAAGCAGCCATTTCATCACTAAGAAAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAG 4363
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4364 ATTTATCTTTTAAAGTTGACACTCTGAGTAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAAT 4437
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4438 AAATTCTCAGAATGGAAGAAGAAAGCACAGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGAT 4511
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4512 CCAGCTTGAGTTAAAATCAAAGGAAGCTTATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATC 4585
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4586 AGCAAAATAAAAGATTTGATTGTTTAAAGGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCT 4659
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4660 AATTTAGAAACAGAGTTAAAGTCTCAAACAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTAT 4733
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4734 TGAAATAGAGTCCTTAAATGAAGTTCTTAAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTC 4807
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4808 AGAAACTTCAACATTTTCAAGAGTTAGGAGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTA 4881
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4882 ACACTTGAAAACCAAGTTTATTCCATGAAAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTT 4955
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4956 AAGTGTGAAAAGCAAAGAGGAGGAGTTAAAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAG 5029
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5030 CAGAGTTGAAGAGAAAAGCTGAACAAAAAATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAA 5103
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5104 GAAGAACAGTATAAAAAAGGTACAGAAAGCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGA 5177
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5178 AGTTCACATCTTGGAAGAAAAACTTAAGTCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAG 5251
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5252 CAAAAAATGTGGCAGCATATACTGAACAAGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAA 5325
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5326 AAAATCAGTGTTTTACAAAGAAACTTAACTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGA 5399
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5400 GACAGTTTCTTCTCATTTTGAAATGCGATGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAA 5473
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5474 AGCAACATGAAGATCAAAGTATGATAGGTCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTG 5547
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5548 ATAGTAGCCCAGCATGTGGAAAAAGAAGGAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTT 5621
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5622 TGACGACGTCCAGAAAACCCTCCAGGAGAAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGG 5695
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5696 ATTCCTGCTTAGTAAGACAGAAAGAAGTACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTA 5769
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5770 CAGGCTTTACAACAGATGGATGGAAGAAATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAA 5843
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5844 ATCACATTTGGTCCAACCCAAATTGCTTAGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCG 5917
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5918 GGGCAGAACGGGAGAAACAGAAACTGGGCAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAG 5991
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5992 GAGCATCAGCAAGAATTGGAAATACTAAAGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCA 6065
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6066 GGAAGATCTTGAACTGAAGCACAATTCCACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAA 6139
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6140 AGGAACAAGAGCTGGAAATGACCATAAAAGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAA 6213
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6214 AGCCATCAAGAAGAGACAAATCAGTTACTTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAA 6287
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6288 AAGATATGAAGAAATCCTTGATGCTCGTGAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTG 6361
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6362 AGGAGCTGCAGAAGAAATACCAGCAAAAGCTAGAGCAGGAGGAGAACCCTGGCAATGATAATGTAACAATTATG 6435
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6436 GAGCTACAGACACAGCTAGCACAGAAGACGACTTTAATCAGTGATTCGAAATTGAAAGAGCAAGAGTTCAGAGA 6509
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6510 ACAGATTCACAATTTAGAAGACCGTTTGAAGAAATATGAAAAGAATGTATATGCAACAACTGTGGGGACACCTT 6583
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6584 ACAAAGGTGGCAATTTGTACCATACGGATGTCTCACTCTTTGGAGAACCTACCGAATTTGAGTATTTGCGAAAA 6657
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6658 GTGCTTTTTGAGTATATGATGGGTCGTGAGACTAAGACCATGGCAAAAGTTATAACCACCGTACTGAAGTTCCC 6731
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6732 TGATGATCAGACTCAGAAAATTTTGGAAAGAGAAGATGCTCGGCTGATGTTTACTTCACCTCGCAGTGGTATCT 6805
Query 499 -- 498
Sbjct 6806 TC 6807
