Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10854
- Subject:
- XM_017006184.1
- Aligned Length:
- 6829
- Identities:
- 494
- Gaps:
- 6332
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAG-------------------------------------------------------------- 160
||||||||||||
Sbjct 149 CACCCAATAGAGAGCTACTAGCCGGGATGATAGCAGAGCCTGCTTTTCTCTCTGAGTATACTATCTTTGCTTTG 222
Query 161 -------------------------------------------------------------------------- 160
Sbjct 223 GATTCCTCCAAACATCCTAAAACACAGAGTGACAGTGTGAATGCATCTACTCATGCCTCGAAATCTCCTGACAG 296
Query 161 -----------------------------AGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 205
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTTAATGGAAGTGAACCAAGCATTCCTCAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 370
Query 206 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 444
Query 280 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 518
Query 354 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 592
Query 428 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAGTCATG-----GC---TCCGAT-CT 492
|||||||||||||||||||||||||||||||||||||||||||||||||| |.|| || ||.||| ||
Sbjct 593 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAG-CTTGTTACAGCTTATCAGATGCT 665
Query 493 TC---------------ATCT----------------------------------------------------- 498
|| |.||
Sbjct 666 TCAGAGAGAGAAGAAAAAGCTACAAGGTATATTAAGTCAGAGTCAGGATAAATCACTTCGGAGAATAGCAGAAT 739
Query 499 -------------------------------------------------------------------------- 498
Sbjct 740 TAAGAGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCAAGAGGAGTTTGATGCATCTTTAGAGGAG 813
Query 499 -------------------------------------------------------------------------- 498
Sbjct 814 AAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGAAACAACGATTACGAAATGGCCCGATGAA 887
Query 499 -------------------------------------------------------------------------- 498
Sbjct 888 TGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAAGTCTTCACTAAAGAAGAGAATCCAGAAA 961
Query 499 -------------------------------------------------------------------------- 498
Sbjct 962 GTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAAGAGTGAAGCGT 1035
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1036 CAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATAAGGAACAATGTACACTATTAACTAGTGA 1109
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1110 AAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGACCTTCATATGGCCG 1183
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1184 AGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAGATAAGGGAATG 1257
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1258 GTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATTGCTCAACTCCGTAG 1331
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1332 TCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAGAAAGAAAAGTCCGAAAGAGCTGCTTTTG 1405
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1406 AGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGCACGGAGAAAACTGAAGGCAGAAATGGAT 1479
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1480 GAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCAGTCTTCAACAGGAATTAAGTCGGGTGAA 1553
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1554 ACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATTGCTAAGCTACAGAAGCTTCATGAAAAGG 1627
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1628 AGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCGAGAAAGGGAATTTCAGGAACAAATGAAA 1701
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1702 GTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAGAAAAAGAACAGCAAGAATCTTTGGCCCT 1775
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1776 AGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAAAATAAACTTCGGGACCTTCAGCAAGAAG 1849
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1850 CAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGAAAAAAGCTTACAAGAAAACAAAAATCAG 1923
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1924 TCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACAATAAGGAGATTACAGTCATGGTTGAAAA 1997
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1998 ACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTTTGGACTGAAAAACTCCAAGTCTTAAAGC 2071
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2072 AACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACAAGAAAAAGAAACATTGTTGAAAGACAAA 2145
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2146 GAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTGAAGCAAACAGA 2219
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2220 ACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGTCACAAACTAGAAGAGGAACTTTCTGTTC 2293
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2294 TGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGATGGATGAACAGAAAAATCATCACCAGCAG 2367
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2368 CAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGACTGAGAAGGCATTAAAAGATCAAATTAA 2441
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2442 TCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAGCATCAGGCTCATGTAGAAAATTTAGAGG 2515
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2516 CAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAAGCTGGACGTTTTTCAGTCTTACCAGAGT 2589
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2590 GCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAATTGCAGCAGAAGTTGTTGGATTTGGAAAC 2663
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2664 AGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAAAAGAAAGATGTTTGTACTGAGTTAGATG 2737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2738 CTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACAAAATAGTGAAATGGAGCAAAAAGTAAAA 2811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2812 TCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAGAACAGGAACAGACAAAGCAAATCTTGGT 2885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2886 GGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAAGAAATTGAGATACTCACACAGAAATTGT 2959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2960 CAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAACCAAATTTAAAAACCAAGAAAAAAAGATG 3033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3034 GAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGAAAAAATTACTGGATCAGGAAGCCAAACT 3107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3108 TAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAAAAACAGTTTAATGCCAAAATGCTGGAAA 3181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3182 TGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACTGGAAACAAACCAAAAAGAACAAATAGAA 3255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3256 AGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAATCTGGGAAAAGAAACTTAATCAGCAAGC 3329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3330 TGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAACAAGAGGTAGCAGAACTGAAACAAAAGA 3403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3404 TCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAACATGGCTGAAGGAAGAAGGTGTTAAGCAG 3477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3478 GATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTGCCCATGTGAATTCTCTTGCACAAGATGA 3551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3552 AACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAATAAGTCTCTGAAGGAAAATACTTTTCTTC 3625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3626 AAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCGGAAGGTTTCTGAGTTGACTAGCAAGTTG 3699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3700 AAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAAAAAGTAACAAAAGCCTAGAGGACAAGAG 3773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3774 CTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGATATTTGCTGTAAGAAAACCGAAGCCTTAT 3847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3848 TAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAACTAATGCCATTCTTTCTAGGATTTCTCAT 3921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3922 TGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAATTAGAAGCACA 3995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3996 ACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTTCAACAGGCTACTCATCAGTTAGAAGAAA 4069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4070 AAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGTAACAGAAAAAGAAGCCTTACAGAAGGAA 4143
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4144 GGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAACACAGTTGAAGAAAGAGTTATCTGAAAA 4217
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4218 CATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAAGTTGAGATTAGCAGTCTTAGTAAACAAC 4291
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4292 TAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGAAAAAGAAGCAGCCATTTCATCACTAAGA 4365
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4366 AAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAGATTTATCTTTTAAAGTTGACACTCTGAG 4439
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4440 TAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAATAAATTCTCAGAATGGAAGAAGAAAGCAC 4513
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4514 AGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGATCCAGCTTGAGTTAAAATCAAAGGAAGCT 4587
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4588 TATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATCAGCAAAATAAAAGATTTGATTGTTTAAA 4661
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4662 GGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCTAATTTAGAAACAGAGTTAAAGTCTCAAA 4735
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4736 CAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTATTGAAATAGAGTCCTTAAATGAAGTTCTT 4809
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4810 AAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTCAGAAACTTCAACATTTTCAAGAGTTAGG 4883
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4884 AGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTAACACTTGAAAACCAAGTTTATTCCATGA 4957
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4958 AAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTTAAGTGTGAAAAGCAAAGAGGAGGAGTTA 5031
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5032 AAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAGCAGAGTTGAAGAGAAAAGCTGAACAAAA 5105
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5106 AATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAAGAAGAACAGTATAAAAAAGGTACAGAAA 5179
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5180 GCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGAAGTTCACATCTTGGAAGAAAAACTTAAG 5253
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5254 TCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAGCAAAAAATGTGGCAGCATATACTGAACA 5327
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5328 AGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAAAAAATCAGTGTTTTACAAAGAAACTTAA 5401
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5402 CTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGAGACAGTTTCTTCTCATTTTGAAATGCGA 5475
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5476 TGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAAAGCAACATGAAGATCAAAGTATGATAGG 5549
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5550 TCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTGATAGTAGCCCAGCATGTGGAAAAAGAAG 5623
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5624 GAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTTTGACGACGTCCAGAAAACCCTCCAGGAG 5697
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5698 AAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGGATTCCTGCTTAGTAAGACAGAAAGAAGT 5771
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5772 ACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTACAGGCTTTACAACAGATGGATGGAAGAA 5845
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5846 ATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAAATCACATTTGGTCCAACCCAAATTGCTT 5919
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5920 AGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCGGGGCAGAACGGGAGAAACAGAAACTGGG 5993
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5994 CAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAGGAGCATCAGCAAGAATTGGAAATACTAA 6067
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6068 AGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAACTGAAGCACAATTCC 6141
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6142 ACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAAAGGAACAAGAGCTGGAAATGACCATAAA 6215
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6216 AGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGACAAATCAGTTAC 6289
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6290 TTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAAAAGATATGAAGAAATCCTTGATGCTCGT 6363
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6364 GAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTGAGGAGCTGCAGAAGAAATACCAGCAAAA 6437
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6438 GCTAGAGCAGGAGGAGAACCCTGGCAATGATAATACACAGCTAGCACAGAAGACGACTTTAATCAGTGATTCGA 6511
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6512 AATTGAAAGAGCAAGAGTTCAGAGAACAGATTCACAATTTAGAAGACCGTTTGAAGAAATATGAAAAGAATGTA 6585
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6586 TATGCAACAACTGTGGGGACACCTTACAAAGGTGGCAATTTGTACCATACGGATGTCTCACTCTTTGGAGAACC 6659
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6660 TACCGAATTTGAGTATTTGCGAAAAGTGCTTTTTGAGTATATGATGGGTCGTGAGACTAAGACCATGGCAAAAG 6733
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6734 TTATAACCACCGTACTGAAGTTCCCTGATGATCAGACTCAGAAAATTTTGGAAAGAGAAGATGCTCGGCTGATG 6807
Query 499 --------------------- 498
Sbjct 6808 TCATGGCTCCGATCTTCATCT 6828
