Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10854
- Subject:
- XM_017006186.1
- Aligned Length:
- 6856
- Identities:
- 392
- Gaps:
- 6461
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ----------------------------ATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 46
Query 149 CACCCAATAGAG-------------------------------------------------------------- 160
||||||||||||
Sbjct 47 CACCCAATAGAGAGCTACTAGCCGGGATGATAGCAGAGCCTGCTTTTCTCTCTGAGTATACTATCTTTGCTTTG 120
Query 161 -------------------------------------------------------------------------- 160
Sbjct 121 GATTCCTCCAAACATCCTAAAACACAGAGTGACAGTGTGAATGCATCTACTCATGCCTCGAAATCTCCTGACAG 194
Query 161 -----------------------------AGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 205
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 TGTTAATGGAAGTGAACCAAGCATTCCTCAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGG 268
Query 206 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 269 TGCCCTCCGTGGAGTCTTTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTG 342
Query 280 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 GTACGAACATCTTCCAGAGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTC 416
Query 354 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 TGATATGGATAGCGAGGCTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGT 490
Query 428 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAGTCATG-----GC---TCCGAT-CT 492
|||||||||||||||||||||||||||||||||||||||||||||||||| |.|| || ||.||| ||
Sbjct 491 TGCGAAGAATGGAACGAAGCTTAAGTAGCTACAGGGGAAAATATTCTGAG-CTTGTTACAGCTTATCAGATGCT 563
Query 493 TC---------------ATCT----------------------------------------------------- 498
|| |.||
Sbjct 564 TCAGAGAGAGAAGAAAAAGCTACAAGGTATATTAAGTCAGAGTCAGGATAAATCACTTCGGAGAATAGCAGAAT 637
Query 499 -------------------------------------------------------------------------- 498
Sbjct 638 TAAGAGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCAAGAGGAGTTTGATGCATCTTTAGAGGAG 711
Query 499 -------------------------------------------------------------------------- 498
Sbjct 712 AAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGAAACAACGATTACGAAATGGCCCGATGAA 785
Query 499 -------------------------------------------------------------------------- 498
Sbjct 786 TGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAAGTCTTCACTAAAGAAGAGAATCCAGAAA 859
Query 499 -------------------------------------------------------------------------- 498
Sbjct 860 GTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAAGAGTGAAGCGT 933
Query 499 -------------------------------------------------------------------------- 498
Sbjct 934 CAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATAAGGAACAATGTACACTATTAACTAGTGA 1007
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1008 AAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGACCTTCATATGGCCG 1081
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1082 AGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAGATAAGGGAATG 1155
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1156 GTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATTGCTCAACTCCGTAG 1229
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1230 TCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAGAAAGAAAAGTCCGAAAGAGCTGCTTTTG 1303
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1304 AGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGCACGGAGAAAACTGAAGGCAGAAATGGAT 1377
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1378 GAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCAGTCTTCAACAGGAATTAAGTCGGGTGAA 1451
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1452 ACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATTGCTAAGCTACAGAAGCTTCATGAAAAGG 1525
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1526 AGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCGAGAAAGGGAATTTCAGGAACAAATGAAA 1599
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1600 GTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAGAAAAAGAACAGCAAGAATCTTTGGCCCT 1673
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1674 AGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAAAATAAACTTCGGGACCTTCAGCAAGAAG 1747
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1748 CAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGAAAAAAGCTTACAAGAAAACAAAAATCAG 1821
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1822 TCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACAATAAGGAGATTACAGTCATGGTTGAAAA 1895
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1896 ACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTTTGGACTGAAAAACTCCAAGTCTTAAAGC 1969
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1970 AACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACAAGAAAAAGAAACATTGTTGAAAGACAAA 2043
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2044 GAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTGAAGCAAACAGA 2117
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2118 ACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGTCACAAACTAGAAGAGGAACTTTCTGTTC 2191
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2192 TGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGATGGATGAACAGAAAAATCATCACCAGCAG 2265
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2266 CAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGACTGAGAAGGCATTAAAAGATCAAATTAA 2339
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2340 TCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAGCATCAGGCTCATGTAGAAAATTTAGAGG 2413
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2414 CAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAAGCTGGACGTTTTTCAGTCTTACCAGAGT 2487
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2488 GCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAATTGCAGCAGAAGTTGTTGGATTTGGAAAC 2561
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2562 AGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAAAAGAAAGATGTTTGTACTGAGTTAGATG 2635
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2636 CTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACAAAATAGTGAAATGGAGCAAAAAGTAAAA 2709
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2710 TCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAGAACAGGAACAGACAAAGCAAATCTTGGT 2783
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2784 GGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAAGAAATTGAGATACTCACACAGAAATTGT 2857
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2858 CAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAACCAAATTTAAAAACCAAGAAAAAAAGATG 2931
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2932 GAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGAAAAAATTACTGGATCAGGAAGCCAAACT 3005
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3006 TAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAAAAACAGTTTAATGCCAAAATGCTGGAAA 3079
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3080 TGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACTGGAAACAAACCAAAAAGAACAAATAGAA 3153
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3154 AGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAATCTGGGAAAAGAAACTTAATCAGCAAGC 3227
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3228 TGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAACAAGAGGTAGCAGAACTGAAACAAAAGA 3301
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3302 TCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAACATGGCTGAAGGAAGAAGGTGTTAAGCAG 3375
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3376 GATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTGCCCATGTGAATTCTCTTGCACAAGATGA 3449
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3450 AACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAATAAGTCTCTGAAGGAAAATACTTTTCTTC 3523
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3524 AAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCGGAAGGTTTCTGAGTTGACTAGCAAGTTG 3597
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3598 AAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAAAAAGTAACAAAAGCCTAGAGGACAAGAG 3671
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3672 CTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGATATTTGCTGTAAGAAAACCGAAGCCTTAT 3745
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3746 TAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAACTAATGCCATTCTTTCTAGGATTTCTCAT 3819
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3820 TGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAATTAGAAGCACA 3893
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3894 ACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTTCAACAGGCTACTCATCAGTTAGAAGAAA 3967
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3968 AAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGTAACAGAAAAAGAAGCCTTACAGAAGGAA 4041
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4042 GGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAACACAGTTGAAGAAAGAGTTATCTGAAAA 4115
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4116 CATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAAGTTGAGATTAGCAGTCTTAGTAAACAAC 4189
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4190 TAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGAAAAAGAAGCAGCCATTTCATCACTAAGA 4263
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4264 AAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAGATTTATCTTTTAAAGTTGACACTCTGAG 4337
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4338 TAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAATAAATTCTCAGAATGGAAGAAGAAAGCAC 4411
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4412 AGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGATCCAGCTTGAGTTAAAATCAAAGGAAGCT 4485
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4486 TATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATCAGCAAAATAAAAGATTTGATTGTTTAAA 4559
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4560 GGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCTAATTTAGAAACAGAGTTAAAGTCTCAAA 4633
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4634 CAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTATTGAAATAGAGTCCTTAAATGAAGTTCTT 4707
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4708 AAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTCAGAAACTTCAACATTTTCAAGAGTTAGG 4781
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4782 AGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTAACACTTGAAAACCAAGTTTATTCCATGA 4855
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4856 AAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTTAAGTGTGAAAAGCAAAGAGGAGGAGTTA 4929
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4930 AAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAGCAGAGTTGAAGAGAAAAGCTGAACAAAA 5003
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5004 AATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAAGAAGAACAGTATAAAAAAGGTACAGAAA 5077
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5078 GCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGAAGTTCACATCTTGGAAGAAAAACTTAAG 5151
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5152 TCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAGCAAAAAATGTGGCAGCATATACTGAACA 5225
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5226 AGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAAAAAATCAGTGTTTTACAAAGAAACTTAA 5299
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5300 CTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGAGACAGTTTCTTCTCATTTTGAAATGCGA 5373
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5374 TGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAAAGCAACATGAAGATCAAAGTATGATAGG 5447
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5448 TCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTGATAGTAGCCCAGCATGTGGAAAAAGAAG 5521
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5522 GAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTTTGACGACGTCCAGAAAACCCTCCAGGAG 5595
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5596 AAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGGATTCCTGCTTAGTAAGACAGAAAGAAGT 5669
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5670 ACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTACAGGCTTTACAACAGATGGATGGAAGAA 5743
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5744 ATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAAATCACATTTGGTCCAACCCAAATTGCTT 5817
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5818 AGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCGGGGCAGAACGGGAGAAACAGAAACTGGG 5891
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5892 CAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAGGAGCATCAGCAAGAATTGGAAATACTAA 5965
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5966 AGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAACTGAAGCACAATTCC 6039
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6040 ACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAAAGGAACAAGAGCTGGAAATGACCATAAA 6113
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6114 AGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGACAAATCAGTTAC 6187
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6188 TTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAAAAGATATGAAGAAATCCTTGATGCTCGT 6261
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6262 GAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTGAGGAGCTGCAGAAGAAATACCAGCAAAA 6335
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6336 GCTAGAGCAGGAGGAGAACCCTGGCAATGATAATGTAACAATTATGGAGCTACAGACACAGCTAGCACAGAAGA 6409
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6410 CGACTTTAATCAGTGATTCGAAATTGAAAGAGCAAGAGTTCAGAGAACAGATTCACAATTTAGAAGACCGTTTG 6483
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6484 AAGAAATATGAAAAGAATGTATATGCAACAACTGTGGGGACACCTTACAAAGGTGGCAATTTGTACCATACGGA 6557
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6558 TGTCTCACTCTTTGGAGAACCTACCGAATTTGAGTATTTGCGAAAAGTGCTTTTTGAGTATATGATGGGTCGTG 6631
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6632 AGACTAAGACCATGGCAAAAGTTATAACCACCGTACTGAAGTTCCCTGATGATCAGACTCAGAAAATTTTGGAA 6705
Query 499 ------------------------------------------------ 498
Sbjct 6706 AGAGAAGATGCTCGGCTGATGTTTACTTCACCTCGCAGTGGTATCTTC 6753
