Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10854
- Subject:
- XM_017006188.1
- Aligned Length:
- 6585
- Identities:
- 494
- Gaps:
- 6087
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
Query 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
Query 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
Query 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
Query 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAG----TC---ATGGCTCCG-------------ATC------- 491
||||||||||||||||||||||||||||||||| || ||||..|.| |||
Sbjct 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCAAGA 518
Query 492 ---------TTCATCT---------------------------------------------------------- 498
|.|||||
Sbjct 519 GGAGTTTGATGCATCTTTAGAGGAGAAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGAAAC 592
Query 499 -------------------------------------------------------------------------- 498
Sbjct 593 AACGATTACGAAATGGCCCGATGAATGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAAGTC 666
Query 499 -------------------------------------------------------------------------- 498
Sbjct 667 TTCACTAAAGAAGAGAATCCAGAAAGTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACTGGA 740
Query 499 -------------------------------------------------------------------------- 498
Sbjct 741 AACACTCCAGCAAAGAGTGAAGCGTCAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATAAGG 814
Query 499 -------------------------------------------------------------------------- 498
Sbjct 815 AACAATGTACACTATTAACTAGTGAAAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTAGAA 888
Query 499 -------------------------------------------------------------------------- 498
Sbjct 889 AAGATAAAGGACCTTCATATGGCCGAGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGA 962
Query 499 -------------------------------------------------------------------------- 498
Sbjct 963 ACAGCTTGAACAAGATAAGGGAATGGTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAG 1036
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1037 AAGAAGAAATTGCTCAACTCCGTAGTCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAGAAA 1110
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1111 GAAAAGTCCGAAAGAGCTGCTTTTGAGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGCACG 1184
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1185 GAGAAAACTGAAGGCAGAAATGGATGAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCAGTC 1258
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1259 TTCAACAGGAATTAAGTCGGGTGAAACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATTGCT 1332
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1333 AAGCTACAGAAGCTTCATGAAAAGGAGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCGAGA 1406
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1407 AAGGGAATTTCAGGAACAAATGAAAGTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAGAAA 1480
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1481 AAGAACAGCAAGAATCTTTGGCCCTAGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAAAAT 1554
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1555 AAACTTCGGGACCTTCAGCAAGAAGCAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGAAAA 1628
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1629 AAGCTTACAAGAAAACAAAAATCAGTCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACAATA 1702
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1703 AGGAGATTACAGTCATGGTTGAAAAACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTTTGG 1776
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1777 ACTGAAAAACTCCAAGTCTTAAAGCAACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACAAGA 1850
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1851 AAAAGAAACATTGTTGAAAGACAAAGAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAG 1924
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1925 AAAAGCTTGATGTGAAGCAAACAGAACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGTCAC 1998
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1999 AAACTAGAAGAGGAACTTTCTGTTCTGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGATGGA 2072
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2073 TGAACAGAAAAATCATCACCAGCAGCAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGACTG 2146
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2147 AGAAGGCATTAAAAGATCAAATTAATCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAGCAT 2220
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2221 CAGGCTCATGTAGAAAATTTAGAGGCAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAAGCT 2294
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2295 GGACGTTTTTCAGTCTTACCAGAGTGCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAATTGC 2368
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2369 AGCAGAAGTTGTTGGATTTGGAAACAGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAAAAG 2442
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2443 AAAGATGTTTGTACTGAGTTAGATGCTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACAAAA 2516
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2517 TAGTGAAATGGAGCAAAAAGTAAAATCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAGAAC 2590
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2591 AGGAACAGACAAAGCAAATCTTGGTGGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAAGAA 2664
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2665 ATTGAGATACTCACACAGAAATTGTCAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAACCAA 2738
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2739 ATTTAAAAACCAAGAAAAAAAGATGGAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGAAAA 2812
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2813 AATTACTGGATCAGGAAGCCAAACTTAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAAAAA 2886
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2887 CAGTTTAATGCCAAAATGCTGGAAATGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACTGGA 2960
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2961 AACAAACCAAAAAGAACAAATAGAAAGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAATCT 3034
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3035 GGGAAAAGAAACTTAATCAGCAAGCTGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAACAA 3108
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3109 GAGGTAGCAGAACTGAAACAAAAGATCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAACATG 3182
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3183 GCTGAAGGAAGAAGGTGTTAAGCAGGATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTGCCC 3256
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3257 ATGTGAATTCTCTTGCACAAGATGAAACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAATAAG 3330
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3331 TCTCTGAAGGAAAATACTTTTCTTCAAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCGGAA 3404
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3405 GGTTTCTGAGTTGACTAGCAAGTTGAAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAAAAA 3478
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3479 GTAACAAAAGCCTAGAGGACAAGAGCTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGATATT 3552
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3553 TGCTGTAAGAAAACCGAAGCCTTATTAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAACTAA 3626
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3627 TGCCATTCTTTCTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTT 3700
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3701 GCACAGTTTCTGAATTAGAAGCACAACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTTCAA 3774
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3775 CAGGCTACTCATCAGTTAGAAGAAAAAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGTAAC 3848
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3849 AGAAAAAGAAGCCTTACAGAAGGAAGGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAACAC 3922
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3923 AGTTGAAGAAAGAGTTATCTGAAAACATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAAGTT 3996
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3997 GAGATTAGCAGTCTTAGTAAACAACTAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGAAAA 4070
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4071 AGAAGCAGCCATTTCATCACTAAGAAAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAGATT 4144
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4145 TATCTTTTAAAGTTGACACTCTGAGTAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAATAAA 4218
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4219 TTCTCAGAATGGAAGAAGAAAGCACAGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGATCCA 4292
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4293 GCTTGAGTTAAAATCAAAGGAAGCTTATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATCAGC 4366
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4367 AAAATAAAAGATTTGATTGTTTAAAGGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCTAAT 4440
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4441 TTAGAAACAGAGTTAAAGTCTCAAACAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTATTGA 4514
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4515 AATAGAGTCCTTAAATGAAGTTCTTAAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTCAGA 4588
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4589 AACTTCAACATTTTCAAGAGTTAGGAGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTAACA 4662
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4663 CTTGAAAACCAAGTTTATTCCATGAAAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTTAAG 4736
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4737 TGTGAAAAGCAAAGAGGAGGAGTTAAAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAGCAG 4810
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4811 AGTTGAAGAGAAAAGCTGAACAAAAAATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAAGAA 4884
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4885 GAACAGTATAAAAAAGGTACAGAAAGCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGAAGT 4958
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4959 TCACATCTTGGAAGAAAAACTTAAGTCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAGCAA 5032
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5033 AAAATGTGGCAGCATATACTGAACAAGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAAAAA 5106
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5107 ATCAGTGTTTTACAAAGAAACTTAACTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGAGAC 5180
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5181 AGTTTCTTCTCATTTTGAAATGCGATGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAAAGC 5254
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5255 AACATGAAGATCAAAGTATGATAGGTCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTGATA 5328
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5329 GTAGCCCAGCATGTGGAAAAAGAAGGAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTTTGA 5402
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5403 CGACGTCCAGAAAACCCTCCAGGAGAAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGGATT 5476
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5477 CCTGCTTAGTAAGACAGAAAGAAGTACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTACAG 5550
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5551 GCTTTACAACAGATGGATGGAAGAAATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAAATC 5624
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5625 ACATTTGGTCCAACCCAAATTGCTTAGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCGGGG 5698
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5699 CAGAACGGGAGAAACAGAAACTGGGCAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAGGAG 5772
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5773 CATCAGCAAGAATTGGAAATACTAAAGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCAGGA 5846
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5847 AGATCTTGAACTGAAGCACAATTCCACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAAAGG 5920
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5921 AACAAGAGCTGGAAATGACCATAAAAGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAAAGC 5994
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5995 CATCAAGAAGAGACAAATCAGTTACTTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAAAAG 6068
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6069 ATATGAAGAAATCCTTGATGCTCGTGAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTGAGG 6142
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6143 AGCTGCAGAAGAAATACCAGCAAAAGCTAGAGCAGGAGGAGAACCCTGGCAATGATAATGTAACAATTATGGAG 6216
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6217 CTACAGACACAGCTAGCACAGAAGACGACTTTAATCAGTGATTCGAAATTGAAAGAGCAAGAGTTCAGAGAACA 6290
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6291 GATTCACAATTTAGAAGACCGTTTGAAGAAATATGAAAAGAATGTATATGCAACAACTGTGGGGACACCTTACA 6364
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6365 AAGGTGGCAATTTGTACCATACGGATGTCTCACTCTTTGGAGAACCTACCGAATTTGAGTATTTGCGAAAAGTG 6438
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6439 CTTTTTGAGTATATGATGGGTCGTGAGACTAAGACCATGGCAAAAGTTATAACCACCGTACTGAAGTTCCCTGA 6512
Query 499 ------------------------------------------------------------------------- 498
Sbjct 6513 TGATCAGACTCAGAAAATTTTGGAAAGAGAAGATGCTCGGCTGATGTTTACTTCACCTCGCAGTGGTATCTTC 6585
