Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10863
- Subject:
- NM_010349.2
- Aligned Length:
- 2627
- Identities:
- 919
- Gaps:
- 1588
Alignment
Query 1 ATGAAGATTATTTTCCCGATTCTAAGTAATCCAGTCTTCAGGCGCACCGTTAAACTCCTGCTCTGTTTACTGTG 74
|||||||||||||.|||..||.|||||||||.|||||||||.|||.||.|||||.||||||||||.||..||||
Sbjct 1 ATGAAGATTATTTCCCCAGTTTTAAGTAATCTAGTCTTCAGTCGCTCCATTAAAGTCCTGCTCTGCTTGTTGTG 74
Query 75 GATTGGATATTCTCAAGGAACCACACATGTATTAAGATTTGGTGGTATTTTTGAATATGTGGAATCTGGCCCAA 148
|||.||||||||.|||||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||.|
Sbjct 75 GATCGGATATTCGCAAGGAACCACACATGTGTTAAGATTCGGTGGTATATTTGAATATGTGGAATCTGGCCCTA 148
Query 149 TGGGAGCTGAGGAACTTGCATTCAGATTTGCTGTGAACACAATTAACAGAAACAGAACATTGCTACCCAATACT 222
||||||||||.||||||||||||||||||||||||||.|||||.|||||.|||||.||..|||||||||||||.
Sbjct 149 TGGGAGCTGAAGAACTTGCATTCAGATTTGCTGTGAATACAATCAACAGGAACAGGACTCTGCTACCCAATACC 222
Query 223 ACCCTTACCTATGATACCCAGAAGATAAACCTTTATGATAGTTTTGAAGCATCCAAGAAAGCCTGTGATCAGCT 296
||..|.||.||||||||.||||||||.||.||.|||||.||||||||||||||.||||||||.|||||||||||
Sbjct 223 ACGTTAACATATGATACACAGAAGATCAATCTCTATGACAGTTTTGAAGCATCTAAGAAAGCTTGTGATCAGCT 296
Query 297 GTCTCTTGGGGTGGCTGCCATCTTCGGGCCTTCACACAGCTCATCAGCAAACGCAGTGCAGTCCATCTGCAATG 370
|||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.||.||||||||||||||||
Sbjct 297 GTCTCTTGGGGTGGCTGCCATCTTCGGTCCTTCACACAGTTCATCAGCAAATGCTGTTCAGTCCATCTGCAATG 370
Query 371 CTCTGGGAGTTCCCCACATACAGACCCGCTGGAAGCACCAGGTGTCAGACAACAAAGATTCCTTCTATGTCAGT 444
|||||||.|||||.||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 371 CTCTGGGGGTTCCTCACATACAGACCCGCTGGAAGCACCAGGTGTCAGACAATAAGGATTCCTTCTATGTCAGT 444
Query 445 CTCTACCCAGACTTCTCTTCACTCAGCCGTGCCATTTTAGACCTGGTGCAGTTTTTCAAGTGGAAAACCGTCAC 518
||||||||||||||||||||.||||||||||||||.||.||..|||||||||||||.|||||||||||.|||||
Sbjct 445 CTCTACCCAGACTTCTCTTCCCTCAGCCGTGCCATCTTGGATTTGGTGCAGTTTTTTAAGTGGAAAACTGTCAC 518
Query 519 GGTTGTGTATGATGACAGCACTGGTCTCATTCGTTTGCAAGAGCTCATCAAAGCTCCATCAAGGTATAATCTTC 592
.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||
Sbjct 519 AGTTGTGTATGACGACAGCACTGGTCTCATTCGCTTGCAAGAGCTCATCAAAGCTCCATCAAGGTACAATCTTC 592
Query 593 GACTCAAAATTCGTCAGTTACCTGCTGATACAAAGGATGCAAAACCCTTACTAAAAGAAATGAAAAGAGGCAAG 666
||||.||||||||||||.|.||.|||||||||||.||||||||.||.||.||.|||||.|||||.||.||||||
Sbjct 593 GACTTAAAATTCGTCAGCTGCCAGCTGATACAAAAGATGCAAAGCCTTTGCTGAAAGAGATGAAGAGGGGCAAG 666
Query 667 GAGTTTCATGTAATCTTTGATTGTAGCCATGAAATGGCAGCAGGCATTTTAAAACAGGCATTAGCTATGGGAAT 740
|||||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 667 GAGTTCCACGTGATCTTCGACTGCAGCCATGAAATGGCAGCAGGCATTTTAAAGCAGGCATTAGCTATGGGAAT 740
Query 741 GATGACAGAATACTATCATTATATCTTTACCACTCTGGACCTCTTTGCTCTTGATGTTGAGCCCTACCGATACA 814
|||||||||||||||.||.|||||.|||||.||||||||||||||.|||||||||||.|||||||||.||||||
Sbjct 741 GATGACAGAATACTACCACTATATATTTACGACTCTGGACCTCTTCGCTCTTGATGTGGAGCCCTACAGATACA 814
Query 815 GTGGTGTTAACATGACAGGGTTCAGAATATTAAATACAGAAAATACCCAAGTCTCCTCCATCATTGAAAAGTGG 888
||||.||.||.||||||||||||||||||.||||||||||.|||||||||||||||||||||||.||.||||||
Sbjct 815 GTGGCGTAAATATGACAGGGTTCAGAATACTAAATACAGAGAATACCCAAGTCTCCTCCATCATCGAGAAGTGG 888
Query 889 TCGATGGAACGATTGCAGGCACCTCCGAAACCCGATTCAGGTTTGCTGGATGGATTTATGACGA-TGGAGTTTC 961
|||||||||||.||.|||||||||||.|||||.||.|||||||||||||||||||||||||||| ||..|.|.|
Sbjct 889 TCGATGGAACGGTTACAGGCACCTCCAAAACCTGACTCAGGTTTGCTGGATGGATTTATGACGACTGATGCTGC 962
Query 962 ACTCTTGTTGCCCAGGCTGGAGTGCA--------ATGGCGCGATC----------------------TCACCTC 1005
.||..||| |.|.||.|||||| .||..||..|| |||.|||
Sbjct 963 TCTGATGT-----ATGATGCAGTGCACGTTGTGTCTGTAGCTGTCCAACAGTTTCCCCAGATGACAGTCAGCTC 1031
Query 1006 ACTGCAACCTCTGC------------CTCCTGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAG-------- 1059
..||||| ||| | |||| |||.| ||..|.||| ||.||..|||
Sbjct 1032 CTTGCAA----TGCAATCGACACAAAC-CCTG-------GCGCT--TTGGGACTC-GCTTCATGAGCCTAATTA 1090
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1091 AAGAGGCTCATTGGGAAGGTCTTACAGGCAGAATTACATTTAACAAAACCAATGGATTGCGAACAGATTTTGAT 1164
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1165 TTGGATGTGATCAGTCTCAAGGAAGAAGGTCTGGAGAAGATTGGGACTTGGGATCCATCCAGTGGCCTGAATAT 1238
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1239 GACAGAAAGTCAGAAAGGGAAGCCAGCAAATATTACAGATTCATTGTCTAATCGTTCTTTGATTGTTACCACCA 1312
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1313 TTTTGGAAGAACCATATGTCCTGTTTAAGAAGTCTGACAAACCTCTCTATGGGAATGATCGATTTGAAGGCTAC 1386
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1387 TGTATTGATCTTCTACGAGAGTTATCTACAATCCTTGGCTTTACATATGAAATTAGGCTTGTGGAGGATGGGAA 1460
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1461 ATATGGAGCCCAGGATGATGTGAATGGACAATGGAATGGAATGGTTCGTGAGCTAATTGATCATAAAGCTGACC 1534
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1535 TTGCAGTTGCTCCACTGGCTATTACCTATGTTCGTGAGAAGGTCATCGACTTTTCAAAGCCGTTTATGACTCTT 1608
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1609 GGAATAAGTATTTTGTACCGCAAGCCCAATGGTACAAACCCAGGCGTCTTCTCCTTCCTGAATCCTCTCTCCCC 1682
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1683 TGATATCTGGATGTATGTTCTGCTGGCTTGCTTGGGTGTCAGTTGTGTGCTCTTTGTCATAGCCAGGTTTAGTC 1756
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1757 CCTATGAGTGGTATAATCCACACCCTTGCAACCCTGACTCAGACGTGGTGGAAAACAATTTTACCTTGCTAAAT 1830
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1831 AGTTTCTGGTTTGGAGTTGGAGCTCTCATGCGGCAAGGTTCTGAGCTCATGCCCAAAGCACTCTCCACCAGGAT 1904
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1905 AGTGGGAGGCATTTGGTGGTTTTTCACACTTATCATCATTTCTTCGTATACCGCTAACCTAGCCGCCTTTCTGA 1978
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 1979 CCGTGGAACGCATGGAGTCGCCTATTGACTCTGCTGACGATTTAGCTAAGCAAACCAAGATAGAATATGGAGCA 2052
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2053 GTAGAGGACGGCGCAACCATGACGTTTTTCAAGAAATCAAAAATCTCAACGTATGATAAAATGTGGGCATTTAT 2126
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2127 GAGCAGCAGGAGACAGTCTGTGCTTGTCAAAAGCAATGAGGAAGGGATTCAACGTGTCCTCACCTCCGATTATG 2200
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2201 CTTTCTTAATGGAGTCAACGACCATCGAGTTTGTTACCCAGCGGAACTGTAACCTCACGCAGATTGGTGGCCTT 2274
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2275 ATAGACTCCAAAGGCTATGGTGTTGGCACTCCCATGGGTTCTCCATATCGAGACAAAATCACCATAGCCATTCT 2348
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2349 TCAGCTGCAGGAGGAAGGCAAGCTGCACATGATGAAGGAGAAGTGGTGGCGAGGCAATGGCTGCCCAGAGGAGG 2422
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2423 AGAGCAAAGAGGCCAGTGCTCTAGGGGTGCAGAATATTGGTGGTATCTTCATTGTCCTGGCAGCCGGCTTGGTG 2496
Query 1060 -------------------------------------------------------------------------- 1059
Sbjct 2497 CTCTCAGTTTTTGTGGCAGTGGGAGAGTTTTTATACAAATCCAAAAAAAACGCTCAATTGGAAAAGGAATCTTC 2570
Query 1060 ------------------------------------- 1059
Sbjct 2571 TATTTGGTTAGTGCCACCATACCATCCAGACACTGTT 2607
