Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10873
• Subject: NM_001098479.2
• Aligned Length: 1348
• Identities: 946
• Gaps: 275

Alignment

Query    1  ATGGCCGTCATGGCGCCCCGAACCCTCGTCCTGCTACTCTCGGGGGCCCTGGCCCTGACCCAGACCTGGGCGGG  74
                     |||||||||||||.||||.|||||||.|||||.||||||||||||||||||.|.||.||||||||
Sbjct    1  ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG  65

Query   75  CTCCCACTCCATGAGGTATTTCTACACCTCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCGCCGTGG  148
            ||||||||||.|||||||||||..||||.|.|||||.|||||||||||||||||||||||||.|||||||||||
Sbjct   66  CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG  139

Query  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGCCAGAGGATGGAGCCGCGGGCGCCG  222
            ..|||||.|||||||||||.|||.||||||||||||||||||||||||..|.|||||||||||||||||.||||
Sbjct  140  AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCGAGGATGGAGCCGCGGGAGCCG  213

Query  223  TGGATAGAGCAGGAGGGGCCGGAGTATTGGGACCGGAACACACGGAATGTGAAGGCCCACTCACAGACTGACCG  296
            |||.|.|||||.|||||||||.||||||||||..|||.||||.||.|.|..||||||.||.|||||||||||||
Sbjct  214  TGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAAGGCCAACGCACAGACTGACCG  287

Query  297  AGAGAGCCTGCGGATCGCGCTCCGCTACTACAACCAGAGCGAGGACGGTTCTCACACCATCCAGAGGATGTATG  370
            ||.|..||||.|||.|..|||||||..|||||||||||||||||..||.|||||||||.|||||.|.|||.|||
Sbjct  288  AGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAATGAATG  361

Query  371  GCTGCGACGTGGGGCCGGACGGGCGCTTCCTCCGCGGGTACCAGCAGGACGCTTACGACGGCAAGGATTACATC  444
            ||||||||.|||||||.|||||.|||.|||||||||||||.||.|||.||||.|||||||||||||||||||||
Sbjct  362  GCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACATC  435

Query  445  GCCCTGAACGAGGACCTGCGCTCTTGGACCGCGGCGGACATGGCGGCTCAGATCACCCAGCGCAAGTGGGAGAC  518
            .||||||||||||||||||||||.||||||||||||||||..|.|||||||||||||||||||           
Sbjct  436  TCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGC-----------  498

Query  519  GGCCCATGAGGCGGA-------GCAGTGGAG---AG--CCTACCTGGAGGGCCGGTGCGTGGAGTGGCTCCGCA  580
             ..|.|||||||.||       ||||.||||   ||  ||||||||||||||..||||.||||||.||||||||
Sbjct  499  -TTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCA  571

Query  581  GATACCTGGAGAACGGGAAGGAGACGCTGCAGCGCACGGACGCCCCCAAGACGCATATGACTCACCACGCTGTC  654
            |||||.|||||||.||||||||||||||.||||||.|.||..|.||.|||.|.||..|..|.||||||.|..||
Sbjct  572  GATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATC  645

Query  655  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGAGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCG  728
            ||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||
Sbjct  646  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCG  719

Query  729  GGATGGGGAGGACCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGGACCTTCCAGAAGT  802
            ||||||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||
Sbjct  720  GGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGT  793

Query  803  GGGCGTCTGTGGTGGTGCCTTCTGGACAGGAGCAGAGATACACCTGCCATGTGCAGCATGAGGGTCTGCCCAAG  876
            ||||..||||||||||||||.|||||.||||.|||||||||||.||||||||||||||.|||||.||||||.||
Sbjct  794  GGGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAG  867

Query  877  CCCCTCACCCTGAGATGGGAGCCGTCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCT  950
            |||||||.||||||||||||||.||||.|||||||||||||||||||||||||||||.||||||||||.|||.|
Sbjct  868  CCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGT  941

Query  951  CTTTGGAGCTGTGATCGCTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGAG  1024
            |.|||||||||||.||.|||||||||||||||||||||||||||||||||.||||||||||||||||||..|||
Sbjct  942  CCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAG  1015

Query 1025  GGAGCTACTCTCAGGCTGCAAG------CAGTG---------------------ACA--GTGCCCA--------  1061
            ||||||||||||||||||| ||      |||||                     |||  |||..||        
Sbjct 1016  GGAGCTACTCTCAGGCTGC-AGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATT  1088

Query 1062  ----------GGGCTCT------GATA-------TGTCTC-----TCACAG---CTT--------GTAAAGTG-  1095
                      |.|||||      ||||       ||.|||     ||||||   |||        |.||.||| 
Sbjct 1089  TCTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGG  1162

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1163  GTGACATGTGGATCTTGTTTTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTT  1236

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1237  CGCTTTGGCTTCGGCTTTAGGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCA  1310

Query 1096  ----------------  1095
                            
Sbjct 1311  GATTAAGATTTTTGAC  1326