Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10874
• Subject: XM_017010812.1
• Aligned Length: 1277
• Identities: 935
• Gaps: 208

Alignment

Query    1  ATGCGGGTCACGGCGCCCCGAACCGTCCTCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCGG  74
                     |.|||||||||||.|.||||||||||||||||.||.|||||||||||||||||.||.|||||.||
Sbjct    1  ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG  65

Query   75  CTCCCACTCCATGAGGTATTTCTACACCGCCATGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCAGTGG  148
            ||||||||||.|||||||||||..||||||..||||.|||||||||||||||||||||||||.||||.|.||||
Sbjct   66  CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG  139

Query  149  GCTACGTGGACGACACGCAGTTCGTGAGGTTCGACAGCGACGCCGCGAGTCCGAGAGA-GGAGCCGCGGGCGCC  221
            ..|||||.|||||||||||.|||.||.|||||||||||||||||||||.|||||| || |||||||||||.|||
Sbjct  140  AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCGAG-GATGGAGCCGCGGGAGCC  212

Query  222  GTGGATAGAGCAGGAGGGGCCGGAGTATTGGGACCGGAACACACAGATCTGCAAGACCAACACACAGACTTACC  295
            ||||.|.|||||.|||||||||.||||||||||..|||.||||..|..|..||||.|||||.||||||||.|||
Sbjct  213  GTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAAGGCCAACGCACAGACTGACC  286

Query  296  GAGAGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGAGGATGTAC  369
            |||.|..||||.|||||||||.|.||..||||||||||||||||||.||||||||||||||||||.|.|||.|.
Sbjct  287  GAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAATGAAT  360

Query  370  GGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATGACCAGTACGCCTACGACGGCAAGGATTACAT  443
            |||||||||.|||||||.|||||.|||||||||||||||.||.|||||.||||.||||||||||||||||||||
Sbjct  361  GGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACAT  434

Query  444  CGCCCTGAACGAGGACCTGAGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCCAGCGCAAGTGGGAGG  517
            |.|||||||||||||||||.||||||||||||||||||||||.|.|||||||||||||||||||...|..||||
Sbjct  435  CTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCTATGAGG  508

Query  518  CGGCCCGTGAG------GCGGAGCAGCTGAGAGCCTACCTGGAGGGCCTGTGCGTGGAGTGGCTCCGCAGATAC  585
            |      .|||      ||.|||.||.|.||..||||||||||||||..||||.||||||.|||||||||||||
Sbjct  509  C------AGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGATAC  576

Query  586  CTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGACCCCCCAAAGACACATGTGACCCACCACCCCATCTCTGA  659
            .|||||||.||||||||||||||.||||||||.||.||.||||||.||||.||..|||||||||||||||||||
Sbjct  577  TTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCTCTGA  650

Query  660  CCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGGATG  733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  651  CCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGGGATG  724

Query  734  GCGAGGACCAAACTCAGGACACCGAGCTTGTGGAGACCAGACCAGCAGGAGATAGAACCTTCCAGAAGTGGGCA  807
            |.|||||.||.||.||||||||.|||||||||||||||||.||.|||||.|||.|||||||||||||||||||.
Sbjct  725  GGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCC  798

Query  808  GCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACATGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCT  881
            |||||||||||||||.|||||||.||.||||||||||||||||||||.|||||.|||||||||||..|||||||
Sbjct  799  GCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGCCCCT  872

Query  882  CACCCTGAGATGGGAGCCATCTTCCCAGTCCACCATCCCCATCGTGGGCATTGTTGCTGGCCTGGCTGTCCTAG  955
            ||.||||||||||||||..|||.|||||.||||||||||||||||||||||.|||||||||||.|.||||||.|
Sbjct  873  CATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTCCTTG  946

Query  956  CAGTTGTGGTCATCGGAGCTGTGGTCGCTACTGTGATGTGTAGGAGGAAGAGCTCAGGTGGAAAAGGAGGGAGC  1029
            .||.||||||||..|||||||||||||||.||||||||||.||||.|||||||||||.|.||||..||||||||
Sbjct  947  GAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAGGGAGC  1020

Query 1030  TACTCTCAGGCTGC-------------GTCCAGCG--------------ACA--GTGCCCA-------------  1061
            ||||||||||||||             || |||||              |||  |||..||             
Sbjct 1021  TACTCTCAGGCTGCAGCCTACTCAGTGGT-CAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTCC  1093

Query 1062  -----GGGCTCT------GAT-------GTGTCTC-----TCACAG---CT-----------------------  1086
                 |.|||||      |||       .||.|||     ||||||   ||                       
Sbjct 1094  TGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGAATGGCATT  1167

Query 1087  --------------------------------------------------------------------------  1086
                                                                                      
Sbjct 1168  ACCTGTTTCAGAGATGAGGCCAAATACCTGTGGAATCTTCTCCACACTGAATTTATCATATTATTTCCCCTGAT  1241

Query 1087  -------------------  1086
                               
Sbjct 1242  GCCTTTAACTTTTTTCCTC  1260