Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10876
• Subject: XM_017010811.1
• Aligned Length: 1323
• Identities: 947
• Gaps: 255

Alignment

Query    1  ATGCGGGTCATGGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCTG  74
                     |||||||||||||.||||.|||||||||||||.||.|||||||||||||||||.||.|||||..|
Sbjct    1  ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG  65

Query   75  CTCCCACTCCATGAGGTATTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCGCAGTGG  148
            ||||||||||.|||||||||||..||||||.|||||.||||||||||||||.||||||||||.||||||.||||
Sbjct   66  CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG  139

Query  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCAAGAGG--GGAGCCGCGGGCGC  220
            ..|||||.|||||||||||.|||.||||||||||||||||||||||||.|||  ||||  |||||||||||.||
Sbjct  140  AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCC--GAGGATGGAGCCGCGGGAGC  211

Query  221  CGTGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGA-CACAGAAGTA---CAAGCGCC-AGGCACAGA  289
            |||||||||||||.|||||||||.||||||||||   |..|| ||||| .|||   |||| ||| |.|||||||
Sbjct  212  CGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGA---GTGGACCACAG-GGTACGCCAAG-GCCAACGCACAGA  280

Query  290  CTGACCGAGTGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGTGG  363
            |||||||||||..||||.|||||||||.|.||..||||||||||||||||||.||||||||||||||||||.|.
Sbjct  281  CTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGA  354

Query  364  ATGTATGGCTGCGACCTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGA  437
            |||.|||||||||||.|||||||||||||.||||||||||||||||||.|||||..|||.||||||||||||||
Sbjct  355  ATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGA  428

Query  438  TTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCAAGT  511
            |||||||.|||||||||||||||||||||||||||||||.||||||||.|.|||||||||||||||||||...|
Sbjct  429  TTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCT  502

Query  512  GGGAGGC---GGCCCGTGCGGCGGAG--CAGCAGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCA  580
            ..|||||   ||....|||.|.||||  |||.|     ||||||||||||||..||||.||||||.||||||||
Sbjct  503  ATGAGGCAGAGGAATATGCAGAGGAGTTCAGGA-----CCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCA  571

Query  581  GATACCTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCTCGTC  654
            |||||.|||||||.||||||||||||||.||||||||.||.|..||||||.|||||||..|||||||.|.|.||
Sbjct  572  GATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATC  645

Query  655  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCG  728
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  646  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCG  719

Query  729  GGATGGCGAGGACCAAACTCAGGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGT  802
            ||||||.|||||.||.||.||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct  720  GGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGT  793

Query  803  GGGCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAG  876
            ||||.|||||||||||||||.|||||||.||.|||||||||||.||||||||||||||||||||||||||..||
Sbjct  794  GGGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAG  867

Query  877  CCCCTCACCCTGAGATGGGAGCCATCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGT  950
            |||||||.||||||||||||||..|||.||||||||||||||||||||||||||||||||||||||||.|.|||
Sbjct  868  CCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGT  941

Query  951  CC-TGGCTGTCCTAGCTGT----CCTAGGAGCTGTGGTGGCTGTTGTTATGTGTAGGAGGAAGAGCTCAG----  1015
            || |||       ||||||    .|| |||||||||||.||||.|||.|||||.||||.|||||||||||    
Sbjct  942  CCTTGG-------AGCTGTGGTCACT-GGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGCCTA  1007

Query 1016  -----------GTGGAAA----AGGA----------------------------GGGAGCTGCTCT--CA----  1040
                       |.|||||    |.||                            ||| |.||||||  ||    
Sbjct 1008  CTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTCCTGGG-GGTGCTCTTCCAAGGA  1080

Query 1041  ------GGCTGCGTCC--AGCAACAGTGCCCAGGGC-------------------------TCT----------  1071
                  ||||||.|||  ||..||||||.|..||||                         |||          
Sbjct 1081  TATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGGGTGACATGTGGATCTTGTTTTTTTT  1154

Query 1072  ---GATGAG----TCTCTCATC-------------GCTTGTAAAGCC---------------------------  1098
               |.||.|    |||.|||.|             .||||.||||||                           
Sbjct 1155  GTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCTTTGGCTTCGGCTTTAGGAGGG  1228

Query 1099  -----------------------------------------------------------------  1098
                                                                             
Sbjct 1229  GCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCAGATTAAGATTTTTGAC  1293