Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10927
- Subject:
- XM_017012183.1
- Aligned Length:
- 2307
- Identities:
- 905
- Gaps:
- 1395
Alignment
Query 1 ATGTGCGGCTCGGCCCTGGCTTTTTTTACCGCTGCATTTGTCTGCCTGCAAAACGACCGGCGAGGTCCCGCCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCCTCTGGGCAGCCTGGGTGTTTTCACTTGTTCTTGGACTGGGCCAAGGTGAAGACAATAGATGTGCATCTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAAATGCAGCATCCTGTGCCAGGTGCCTTGCGCTGGGTCCAGAATGTGGATGGTGTGTTCAAGAGGATTTCATT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCAGGTGGATCAAGAAGTGAACGTTGTGATATTGTTTCCAATTTAATAAGCAAAGGCTGCTCAGTTGATTCAAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGAATACCCATCTGTGCATGTTATAATACCCACTGAAAATGAAATTAATACCCAGGTGACACCAGGAGAAGTGT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTATCCAGCTGCGTCCAGGAGCCGAAGCTAATTTTATGCTGAAAGTTCATCCTCTGAAGAAATATCCTGTGGAT 444
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------------ATGCTGAAAGTTCATCCTCTGAAGAAATATCCTGTGGAT 39
Query 445 CTTTATTATCTTGTTGATGTCTCAGCATCAATGCACAATAATATAGAAAAATTAAATTCCGTTGGAAACGATTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 40 CTTTATTATCTTGTTGATGTCTCAGCATCAATGCACAATAATATAGAAAAATTAAATTCCGTTGGAAACGATTT 113
Query 519 ATCTAGAAAAATGGCATTTTTCTCCCGTGACTTTCGTCTTGGATTTGGCTCATACGTTGATAAAACAGTTTCAC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 ATCTAGAAAAATGGCATTTTTCTCCCGTGACTTTCGTCTTGGATTTGGCTCATACGTTGATAAAACAGTTTCAC 187
Query 593 CATACATTAGCATCCACCCCGAAAGGATTCATAATCAATGCAGTGACTACAATTTAGACTGCATGCCTCCCCAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 CATACATTAGCATCCACCCCGAAAGGATTCATAATCAATGCAGTGACTACAATTTAGACTGCATGCCTCCCCAT 261
Query 667 GGATACATCCATGTGCTGTCTTTGACAGAGAACATCACTGAGTTTGAGAAAGCAGTTCATAGACAGAAGATCTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 GGATACATCCATGTGCTGTCTTTGACAGAGAACATCACTGAGTTTGAGAAAGCAGTTCATAGACAGAAGATCTC 335
Query 741 TGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGTCATATCGGAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 TGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGTCATATCGGAT 409
Query 815 GGCGAAAAGAGGCTAAAAGATTGCTGCTGGTGATGACAGATCAGACGTCTCATCTCGCTCTTGATAGCAAATTG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 GGCGAAAAGAGGCTAAAAGATTGCTGCTGGTGATGACAGATCAGACGTCTCATCTCGCTCTTGATAGCAAATTG 483
Query 889 GCAGGCATAGTGGTGCCCAATGACGGAAACTGTCATCTGAAAAACAACGTCTATGTCAAATCGACAACCATGGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 GCAGGCATAGTGGTGCCCAATGACGGAAACTGTCATCTGAAAAACAACGTCTATGTCAAATCGACAACCATGGA 557
Query 963 ACACCCCTCACTAGGCCAACTTTCAGAGAAATTAATAGACAACAACATTAATGTCATCTTTGCAGTTCAAGGAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 ACACCCCTCACTAGGCCAACTTTCAGAGAAATTAATAGACAACAACATTAATGTCATCTTTGCAGTTCAAGGAA 631
Query 1037 AACAATTTCATTGGTATAAGGATCTTCTACCCCTCTTGCCAGGCACCATTGCTGGTGAAATAGAATCAAAGGCT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 AACAATTTCATTGGTATAAGGATCTTCTACCCCTCTTGCCAGGCACCATTGCTGGTGAAATAGAATCAAAGGCT 705
Query 1111 GCAAACCTCAATAATTTGGTAGTGGAAGCCTATCAGAAGCTCATTTCAGAAGTGAAAGTTCAGGTGGAAAACCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GCAAACCTCAATAATTTGGTAGTGGAAGCCTATCAGAAGCTCATTTCAGAAGTGAAAGTTCAGGTGGAAAACCA 779
Query 1185 GGTACAAGGCATCTATTTTAACATTACCGCCATCTGTCCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GGTACAAGGCATCTATTTTAACATTACCGCCATCTGTCCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCA 853
Query 1259 GAAACGTGACGAGCAATGATGAAGT------------------------------ATGTG--------GG---- 1290
||||||||||||||||||||||||| ||||| ||
Sbjct 854 GAAACGTGACGAGCAATGATGAAGTTCTTTTCAATGTAACAGTTACAATGAAAAAATGTGATGTCACAGGAGGA 927
Query 1291 ------TGTGCATTTTTC---CCT-----TTTAAAATAAAC--------------------------------- 1317
|.||||.|..|| ||| |||.||..||||
Sbjct 928 AAAAACTATGCAATAATCAAACCTATTGGTTTTAATGAAACCGCTAAAATTCATATACACAGAAACTGCAGCTG 1001
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1002 TCAGTGTGAGGACAACAGAGGACCTAAAGGAAAGTGTGTAGATGAAACTTTTCTAGATTCCAAGTGTTTCCAGT 1075
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1076 GTGATGAGAATAAATGTCATTTTGATGAAGATCAGTTTTCTTCTGAGAGTTGCAAGTCACACAAGGATCAGCCT 1149
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1150 GTTTGCAGTGGTCGAGGAGTTTGTGTTTGTGGGAAATGTTCATGTCACAAAATTAAGCTTGGAAAAGTGTATGG 1223
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1224 AAAATACTGTGAAAAGGATGACTTTTCTTGTCCATATCACCATGGAAATCTGTGTGCTGGGCATGGAGAGTGTG 1297
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1298 AAGCAGGCAGATGCCAATGCTTCAGTGGCTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCAC 1371
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1372 TGTGTCAATTCAAAGGGCCAAGTGTGCAGTGGAAGAGGCACGTGTGTGTGTGGAAGGTGTGAGTGCACCGATCC 1445
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1446 CAGGAGCATCGGCCGCTTCTGTGAACACTGCCCCACCTGTTATACAGCCTGCAAGGAAAACTGGAATTGTATGC 1519
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1520 AATGCCTTCACCCTCACAATTTGTCTCAGGCTATACTTGATCAGTGCAAAACCTCATGTGCTCTCATGGAACAA 1593
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1594 CAGCATTATGTCGACCAAACTTCAGAATGTTTCTCCAGCCCAAGCTACTTGAGAATATTTTTCATCATTTTCAT 1667
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1668 AGTTACATTCTTGATTGGGTTGCTTAAAGTCCTGATCATTAGACAGGTGATACTACAATGGAATAGTAATAAAA 1741
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1742 TTAAGTCCTCATCAGATTACAGAGTGTCAGCCTCAAAAAAGGATAAGTTGATTCTGCAAAGTGTTTGCACAAGA 1815
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1816 GCAGTCACCTACCGACGTGAGAAGCCTGAAGAAATAAAAATGGATATCAGCAAATTAAATGCTCATGAAACTTT 1889
Query 1318 ------------- 1317
Sbjct 1890 CAGGTGCAACTTC 1902
