Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10934
- Subject:
- NM_001253372.1
- Aligned Length:
- 3641
- Identities:
- 448
- Gaps:
- 3157
Alignment
Query 1 ATGGCAAATGGTGGCGGCGGCGGCGGCGGCAGCA---GCGGCGGCGGCGGCGGCGGCGGAGGCAGCAGTCTTAG 71
||||||||.||||||||||||||||||||||||| |||||||||||||||||||||||||||||.|||||||
Sbjct 1 ATGGCAAACGGTGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGAGGCAGCGGTCTTAG 74
Query 72 AATGAGTAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTT 145
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||| |||||||
Sbjct 75 AATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCTTCCTCC---TCCTCTT 145
Query 146 CTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATCCCGGTG 219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 146 CTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATACCGGTG 219
Query 220 ACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCCTGGCCTCCTCCATGGTGACTTT 293
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 220 ACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTTT 293
Query 294 CTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTGTGCTGCCACTGCGGGG 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 294 CTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGG 367
Query 368 GCAAGACGAAGGCCACCC---------ACTTTGGGTCC--CC--GGAAATGCCAC---CAGCAGC--------- 416
||||||||||||...||| ||..|||.||| || |.|.|||..|| || |||
Sbjct 368 GCAAGACGAAGGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCA--AGCCAGTGGACG 439
Query 417 -----GCGGAGCTGG----AGCGGGAGTCCGC--------------------CTGAGGCCGCGGT-----TTTA 456
|.||||.||| |||.|..|||.|| ||| |||.|.||| |.|.
Sbjct 440 AAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGGATGACATCTGTGAAGGACTG-GGCAGGGGTGATGATATC 512
Query 457 CGCGGAGCGTCTTCCCTGGCGCTCGAGGTGGCTAGA--------TGTCGTCGGCTT------------------ 504
|||..|| .|.|||.| |||| ||| |||..|.|.|||
Sbjct 513 CGCCCAG-----ACACTGAC--------TGGC-AGAGTCCTGGTTGTGTTAGTCTTTGCTCTCAGCATTGGTGC 572
Query 505 -------------------------------------------------------------------------- 504
Sbjct 573 CCTCGTAATATACTTCATAGACTCGTCAAACCCAATAGAATCCTGCCAGAATTTCTACAAAGATTTCACATTAC 646
Query 505 -------------------------------------------------------------------------- 504
Sbjct 647 AGATCGACATGGCTTTCAACGTGTTCTTCCTCCTCTACTTTGGCTTGCGGTTTATTGCAGCCAACGATAAGCTG 720
Query 505 -------------------------------------------------------------------------- 504
Sbjct 721 TGGTTCTGGCTGGAAGTGAATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGTTTGTGTCTGTGTACTTAAA 794
Query 505 -------------------------------------------------------------------------- 504
Sbjct 795 CAGAAGTTGGCTTGGCTTGAGATTTTTAAGAGCTCTCAGACTGATACAGTTTTCAGAGATTTTGCAGTTTCTGA 868
Query 505 -------------------------------------------------------------------------- 504
Sbjct 869 ATATCCTTAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCTCTCCATATTTATCAGCACGTGGCTGACTGCA 942
Query 505 -------------------------------------------------------------------------- 504
Sbjct 943 GCTGGATTCATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA 1016
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1017 CTGGGAATGTGTCTACTTACTCATGGTCACAATGTCTACAGTGGGTTATGGGGACGTTTATGCAAAAACCACAC 1090
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1091 TTGGACGCCTCTTCATGGTCTTCTTCATCCTCGGGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAATCATA 1164
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1165 GAGTTAATAGGAAACCGCAAGAAATACGGGGGCTCCTATAGCGCGGTTAGTGGAAGAAAGCACATTGTAGTCTG 1238
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1239 TGGACACATTACTCTGGAGAGTGTCTCTAACTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGATGTCAACG 1312
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1313 TGGAGATTGTCTTTCTTCACAACATCTCCCCTAACCTTGAGCTTGAGGCTCTGTTCAAACGGCATTTCACTCAG 1386
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1387 GTGGAGTTTTATCAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGAGTCAAGATAGAGTCAGCAGATGCATG 1460
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1461 CCTGATCCTTGCCAATAAGTATTGCGCTGACCCGGATGCAGAAGATGCCTCCAACATCATGAGAGTGATCTCCA 1534
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1535 TCAAAAACTACCACCCAAAGATCAGGATCATCACTCAGATGCTGCAGTATCACAACAAGGCCCATCTGCTCAAC 1608
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1609 ATCCCCAGCTGGAACTGGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGTTTCATAGCCCA 1682
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1683 GAGCTGTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAGGTCATTCATAAAGATTGAGG 1756
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1757 AAGACACATGGCAGAAATACTACTTGGAAGGAGTCTCCAATGAAATGTACACAGAATATCTCTCCAGTGCCTTC 1830
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1831 GTGGGTCTGTCCTTCCCTACTGTTTGTGAGCTGTGTTTTGTGAAGCTTAAGCTCCTGATGATAGCCATTGAGTA 1904
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1905 CAAGTCTGCCAACAGAGAGAGCCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAG 1978
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1979 GATTTTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGCATTTTTTTACTGCAAGGCCTGTCATGATGACGTC 2052
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2053 ACAGATCCCAAAAGAATTAAAAAATGTGGCTGCAGGCGGCTCAAGGTTGAAGCTAGAGCCCGCTATCACAAAGA 2126
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2127 CCCATTTATGCACAAGAATGCGACTCCCAATTCTCCACACGTGCCCAAGCCAGTTGAAGATGAGCAGCCGCCAA 2200
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2201 CCCTGTCACCAAAAAAAAAACAACGTAATGGGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCTGATGAGG 2274
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2275 CATGACCCCTTGTTAATTCCTGGCAATGATCAGATTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCAC 2348
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2349 TGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTG 2422
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2423 TCCTGAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTG 2496
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2497 ATGCCACTTCGTGCTAGCAACTTTCACTATCATGAGCTCAAACACATTGTGTTTGTGGGCTCCATTGAGTACCT 2570
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2571 CAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATTAAGTCGGGCTG 2644
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2645 ATTTAAGGGCTGTCAACATCAACCTCTGTGACATGTGCGTTATCCTGTCAGCCAATCAGAATAATATTGATGAT 2718
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2719 ACTTCGCTTCAGGACAAGGAATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGG 2792
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2793 GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGC 2866
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2867 ACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCATCACGGAACTCGTGAATGATACC 2940
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2941 AATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACACAGAGCTGTACCTCACACAGCCCTTTGCTTG 3014
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3015 TGGGACAGCATTTGCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACATACTTCAATGACAATATCCTCACCC 3088
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3089 TAATACGGACCCTGGTGACAGGAGGAGCCACACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGA 3162
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3163 GGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGATGG 3236
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3237 TCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACATATAATATGC 3310
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3311 TTTGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATC 3384
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3385 ACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC 3458
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3459 TGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC 3532
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3533 ACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAA 3606
Query 505 --------------- 504
Sbjct 3607 GAAATGGTTTACAGA 3621
