Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10934
- Subject:
- NM_001253374.1
- Aligned Length:
- 3544
- Identities:
- 458
- Gaps:
- 3044
Alignment
Query 1 ATGGCAAATGGTGGCGGCGGCGGCGGCGGCAGCA---GCGGCGGCGGCGGCGGCGGCGGAGGCAGCAGTCTTAG 71
||||||||.||||||||||||||||||||||||| |||||||||||||||||||||||||||||.|||||||
Sbjct 1 ATGGCAAACGGTGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGAGGCAGCGGTCTTAG 74
Query 72 AATGAGTAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTT 145
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||| |||||||
Sbjct 75 AATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCTTCCTCC---TCCTCTT 145
Query 146 CTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATCCCGGTG 219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 146 CTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATACCGGTG 219
Query 220 ACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCCTGGCCTCCTCCATGGTGACTTT 293
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 220 ACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTTT 293
Query 294 CTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTGTGCTGCCACTGCGGGG 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 294 CTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGG 367
Query 368 GCAAGACGAAGG--------------CCACCCA-CTTTGG-GTCCCCGGA------------------------ 401
|||||||||||| .|.|.|| |.|||| |.||.||.|
Sbjct 368 GCAAGACGAAGGTTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCGTAATATACTTCATAGACTCGTCAAAC 441
Query 402 -------AATGCCACCAG------------------------CAGCGCGGAGCTGG-----AGCGGG--AGTCC 437
|||.|..|||| |||..| ||..||| |.||.| ..|||
Sbjct 442 CCAATAGAATCCTGCCAGAATTTCTACAAAGATTTCACATTACAGATC-GACATGGCTTTCAACGTGTTCTTCC 514
Query 438 GC-----CTGAGGC-CGCGGTTT--------------TACGC--------------GGAGCG------------ 465
.| ||..||| .||||||| ||.|| |.||.|
Sbjct 515 TCCTCTACTTTGGCTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTTCTGGCTGGAAGTGAATTCAGTAGTA 588
Query 466 ----TCTTCCCTGGCGCTCGAG-----GTGGCT------------AGATGTCG--TCGGCTT------------ 504
|||||.|.|.|.|||..| |||.|| |||.||.| |.|||||
Sbjct 589 GATTTCTTCACAGTCCCTCCTGTGTTTGTGTCTGTGTACTTAAACAGAAGTTGGCTTGGCTTGAGATTTTTAAG 662
Query 505 -------------------------------------------------------------------------- 504
Sbjct 663 AGCTCTCAGACTGATACAGTTTTCAGAGATTTTGCAGTTTCTGAATATCCTTAAAACAAGTAACTCCATCAAGC 736
Query 505 -------------------------------------------------------------------------- 504
Sbjct 737 TGGTGAATCTGCTCTCCATATTTATCAGCACGTGGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGAATTCA 810
Query 505 -------------------------------------------------------------------------- 504
Sbjct 811 GGGGACCCATGGGAAAATTTCCAAAACAACCAGGCACTTACGTACTGGGAATGTGTCTACTTACTCATGGTCAC 884
Query 505 -------------------------------------------------------------------------- 504
Sbjct 885 AATGTCTACAGTGGGTTATGGGGACGTTTATGCAAAAACCACACTTGGACGCCTCTTCATGGTCTTCTTCATCC 958
Query 505 -------------------------------------------------------------------------- 504
Sbjct 959 TCGGGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAAACCGCAAGAAATACGGG 1032
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1033 GGCTCCTATAGCGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGGACACATTACTCTGGAGAGTGTCTCTAA 1106
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1107 CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGATGTCAACGTGGAGATTGTCTTTCTTCACAACATCTCCC 1180
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1181 CTAACCTTGAGCTTGAGGCTCTGTTCAAACGGCATTTCACTCAGGTGGAGTTTTATCAGGGCTCTGTCCTCAAT 1254
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1255 CCACATGATCTTGCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA 1328
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1329 CCCGGATGCAGAAGATGCCTCCAACATCATGAGAGTGATCTCCATCAAAAACTACCACCCAAAGATCAGGATCA 1402
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1403 TCACTCAGATGCTGCAGTATCACAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAACTGGAAAGAGGGTGAT 1476
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1477 GACGCAATATGCCTTGCAGAGCTCAAGTTGGGTTTCATAGCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAAT 1550
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1551 GCTTGCCAATCTCTTCTCTATGAGGTCATTCATAAAGATTGAGGAAGACACATGGCAGAAATACTACTTGGAAG 1624
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1625 GAGTCTCCAATGAAATGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTCTGTCCTTCCCTACTGTTTGTGAG 1698
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1699 CTGTGTTTTGTGAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAATATT 1772
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1773 AATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGAAG 1846
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1847 TTAAAAGGGCATTTTTTTACTGCAAGGCCTGTCATGATGACGTCACAGATCCCAAAAGAATTAAAAAATGTGGC 1920
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1921 TGCAGGCGGCTGATCTATTTTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAAAAAAACAACGTAATGGGGG 1994
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1995 CATGAGGAACTCGCCCAACACCTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAATTCCTGGCAATGATCAGA 2068
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2069 TTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATT 2142
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2143 GAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCATCTTTGG 2216
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2217 GGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAACTTTCACTATCATG 2290
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2291 AGCTCAAACACATTGTGTTTGTGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCG 2364
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2365 AAAGTGTCCATATTGCCTGGTACACCATTAAGTCGGGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGACAT 2438
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2439 GTGCGTTATCCTGTCAGCCAATCAGAATAATATTGATGATACTTCGCTTCAGGACAAGGAATGCATCTTGGCGT 2512
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2513 CACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGGATTCACACCT 2586
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2587 CCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGG 2660
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2661 GGTCAACATTCCCATCATCACGGAACTCGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATG 2734
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2735 ACCCTGACACAGAGCTGTACCTCACACAGCCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCA 2808
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2809 CTCATGAGCGCGACATACTTCAATGACAATATCCTCACCCTAATACGGACCCTGGTGACAGGAGGAGCCACACC 2882
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2883 AGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACA 2956
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2957 GGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTAT 3030
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3031 GGTGATCTGTTCTGCAAAGCTCTGAAAACATATAATATGCTTTGTTTTGGAATTTACCGGCTGAGAGATGCCCA 3104
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3105 CCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAA 3178
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3179 CAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCC 3252
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3253 CACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCG 3326
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3327 GCCCAAGTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAGGATGACTAGAATGGGCCAAGCAGAAAAGAAAT 3400
Query 505 -------------------------------------------------------------------------- 504
Sbjct 3401 GGTTTACAGATGAGCCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC 3474
Query 505 ------------------------------------------------------------------ 504
Sbjct 3475 CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGT 3540
