Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10956
- Subject:
- XM_011514624.2
- Aligned Length:
- 1950
- Identities:
- 573
- Gaps:
- 1365
Alignment
Query 1 ATGAACCGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATCCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGTTAAGTCTCTGAAGAAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTTTATTTTATATTTGAATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATCAGTCATCAGAAATATTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGGACATGAAACCAGAAAACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAATTAAGGTCACAGCCACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ATCTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CACTTTTCCCAGGGACAAGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACTGGCCAGAAGGATACCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 AACTCTTATTCCCAATGCCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAAC 814
||||||||||||||||||||||||||||||||||
Sbjct 1 ----------------------------------------ATGACCGAAATGTTGAATTGGGATCCAAAGAAAC 34
Query 815 GACCGACAGCAAGCCAGGCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35 GACCGACAGCAAGCCAGGCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCAT 108
Query 889 CTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 109 CTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCC 182
Query 963 TAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 TAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGC 256
Query 1037 CCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 257 CCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACG 330
Query 1111 CTATTCCCGAGCATCGTCAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 CTATTCCCGAGCATCGTCAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCG 404
Query 1185 TTGGGGTCAGACTATCTTCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 405 TTGGGGTCAGACTATCTTCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATT 478
Query 1259 CCAAGAAGCCAAGCATGGGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCG---------------- 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CCAAGAAGCCAAGCATGGGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCGGCTTCCAGAGCCAGTA 552
Query 1317 ------------------TCAACAGGTGAAGA------------TGGCTGTTATTTCCCTCTCAGCACACCAGT 1360
||.|||||.|||.| | |||||||.|||||| .|.|.|.|.
Sbjct 553 CCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCT-GCTGTTACTTCCCT-----AAAATCTGA 620
Query 1361 TTCCCA--CGTTA------------------------------------------------------------- 1371
||||.| .||.|
Sbjct 621 TTCCGAATTGTCAACTGCTCCAACCTCTAAACAGTACTACTTGAAACAATCAAGATATCTTCCAGGTGTGAATC 694
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 695 CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAG 768
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 769 TCACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGAAGAAAGCATAATTAAACCAATCGA 842
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 843 AAAACTATCATGCAATGAAACTTTTCCTGAAAAATTAGAGGACCCACAAGGAAATCTTGGAAGTTATGCTACTT 916
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 917 ACAATCAGTCAGGATATATTCCTTCCTTTCTCAAAAAAGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGCA 990
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 991 CCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTTTTCAGGACGTACTTA 1064
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1065 TAATCCTACAGCAAAAAACCTAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACT 1138
Query 1372 -------------------------- 1371
Sbjct 1139 GGGTGGCCAAGTATGGAGGCCACCGG 1164
