Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10956
Subject:
XR_926215.3
Aligned Length:
2316
Identities:
1353
Gaps:
951

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAACACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGAGGGTGTTTATAAGAATGGAAGTGTTGTTTCCTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGATTCCTTCATGCTATATCTCATGAACCTCTGTAATCTTGGGGGAGAGACTATATTTAATGATGACAAACC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTCACCAGTGTAGCAACAACAGTGTGAGGACAAAAGCAAATAAAAATTAAGAAGCGTTCAAATTTATATTCAA  222

Query    1  ------------------------------------------------ATGAACCGATACACAACCATGAGACA  26
                                                            ||||||||||||||||||||||||||
Sbjct  223  CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCATTATTTTTCCAAGATGAACCGATACACAACCATGAGACA  296

Query   27  GTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAA  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAA  370

Query  101  GGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAAT  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAAT  444

Query  175  CATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAA  518

Query  249  AGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATC  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATC  592

Query  323  AAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAAAACTTGCTT  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAAAACTTGCTT  666

Query  397  TGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCCACCATACAC  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCCACCATACAC  740

Query  471  TGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCCATTG  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCCATTG  814

Query  545  ATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTC  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTC  888

Query  619  GATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGC  692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGC  962

Query  693  ATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATGCCAGTAATG  766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATGCCAGTAATG  1036

Query  767  AAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA  1110

Query  841  CACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAA  914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAA  1184

Query  915  GCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATC  988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATC  1258

Query  989  AGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGC  1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGC  1332

Query 1063  GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACAT  1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACAT  1406

Query 1137  GCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTCTG  1210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTCTG  1480

Query 1211  GAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGGTGTTTTT  1284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGGTGTTTTT  1554

Query 1285  AAAGAAAAAAGGAAAAAAGATTCTCCATTTCG----------------------------------TCAACAGG  1324
            ||||||||||||||||||||||||||||||||                                  ||.|||||
Sbjct 1555  AAAGAAAAAAGGAAAAAAGATTCTCCATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGG  1628

Query 1325  TGAAGA------------TGGCTGTTATTTCCCTCTCAGCACACCAGTTTCCCA--CGTTA-------------  1371
            .|||.|            | |||||||.||||||     .|.|.|.|.||||.|  .||.|             
Sbjct 1629  GGAAAACAAGAGCTTACCT-GCTGTTACTTCCCT-----AAAATCTGATTCCGAATTGTCAACTGCTCCAACCT  1696

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1697  CTAAACAGTACTACTTGAAACAATCAAGATATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGT  1770

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1771  GGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT  1844

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1845  TGCTTTCAAAAGGAGCAATGCAGAAGAAAGCATAATTAAACCAATCGAAAAACTATCATGCAATGAAACTTTTC  1918

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1919  CTGAAAAATTAGAGGACCCACAAGGAAATCTTGGAAGTTATGCTACTTACAATCAGTCAGGATATATTCCTTCC  1992

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1993  TTTCTCAAAAAAGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGATTT  2066

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2067  TTCTACAGATGGTGATAGGAGGAAAGGTAAAAAATGAAGTAAATATTAATCACTCTCAAGTGGTCAATGCAAAT  2140

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2141  CCTTAGAAAAAACACTGTTCTGTAAGAGATGTGTCTTCCAGTCATGCCAGTTGGGTGACAGTTTCCCACAAGAA  2214

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2215  AATAAAACCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAATCCTACAG  2288

Query 1372  ----------------------  1371
                                  
Sbjct 2289  CAAAAAACCTAAATATTGTGAA  2310

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