Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10957
- Subject:
- XM_005266986.4
- Aligned Length:
- 2280
- Identities:
- 1021
- Gaps:
- 1251
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAAATTTGACCAACTTCTATGAGGGGCTGCAGCCAGCGGTCTGTCGCGCGTGCCTGTGTGCCCGAGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCCCGGGGAGAAGACCCGGCGCGGAGTTGTTCCCCCAGGGAGGATCCGCAGCCCAGCCGAGGGGGTCGGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTGGCTACGCAGGACCCAGCCCCGCAGCCGCGGACTCCCAGCGGCGGCGAAGTTTGGCTGCTGAGCGGCGCG 222
Query 1 ---------------------------ATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGCAGCCCCGCGGGCGG 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCGCCGGACCACTGGACAGCGGGAGCGATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGCAGCCCCGCGGGCGG 296
Query 48 CGTCCTGGGCGGGGGGCTCGGCGGCGGCGGTGGCAGGAAGGGGTCGGGCCCCGCCGCCCTCCGCCTGACGGAGA 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTCCTGGGCGGGGGGCTCGGCGGCGGCGGTGGCAGGAAGGGGTCGGGCCCCGCCGCCCTCCGCCTGACGGAGA 370
Query 122 AGTTCGTGCTGCTGCTGGTATTCAGCGCCTTCATCACGCTCTGCTTCGGGGCGATCTTCTTCCTGCCAGACTCC 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTTCGTGCTGCTGCTGGTATTCAGCGCCTTCATCACGCTCTGCTTCGGGGCGATCTTCTTCCTGCCAGACTCC 444
Query 196 TCCAAGCTGCTCAGCGGGGTCCTGTTCCACTCCAGCCCCGCCTTGCAGCCGGCCGCCGACCACAAGCCCGGGCC 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCAAGCTGCTCAGCGGGGTCCTGTTCCACTCCAGCCCCGCCTTGCAGCCGGCCGCCGACCACAAGCCCGGGCC 518
Query 270 CGGGGCGCGCGCCGAGGACGCGGCCGAGGGGCGAGCCCGGCGCCGCGAGGAGGGGGCACCCGGGGACCCGGAGG 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGGGGCGCGCGCCGAGGACGCGGCCGAGGGGCGAGCCCGGCGCCGCGAGGAGGGGGCACCCGGGGACCCGGAGG 592
Query 344 CCGCCCTGGAGGACAACTTGGCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTG 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGCCCTGGAGGACAACTTGGCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTG 666
Query 418 CAGAAGCTGCCCGAGGAGATCCAAAGAGACATCCTACTGGAGAAGAAGAAGGTGGCCCAGGACCAGCTGCGTGA 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGAAGCTGCCCGAGGAGATCCAAAGAGACATCCTACTGGAGAAGAAGAAGGTGGCCCAGGACCAGCTGCGTGA 740
Query 492 CAAGGCGCCGTTCAGAGGCCTGCCCCCGGTGGACTTCGTGCCCCCAATCGGGGTGGAGAGCCGGGAGCCCGCCG 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAAGGCGCCGTTCAGAGGCCTGCCCCCGGTGGACTTCGTGCCCCCAATCGGGGTGGAGAGCCGGGAGCCCGCCG 814
Query 566 ACGCCGCCATCCGCGAGAAAAGGGCAAAGATCAAAGAGGAAATTGAAGCCAGGAAGGGGCAAGCAAATTGCCCA 639
||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGCCGCCATCCGCGAGAAAAGGGCAAAGATCAAAG-------------------------------------- 850
Query 640 GGGTCGAGCAGCTCCTGCGAGGTTGAAATCCAGATGATGAAACATGCTTGGAATAATTATAAAGGTTATGCCTG 713
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 -------------------------------AGATGATGAAACATGCTTGGAATAATTATAAAGGTTATGCCTG 893
Query 714 GGGATTAAATGAACTCAAACCTATATCAAAAGGAGGCCATTCAAGCAGTTTGTTTGGTAACATCAAAGGAGCAA 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 GGGATTAAATGAACTCAAACCTATATCAAAAGGAGGCCATTCAAGCAGTTTGTTTGGTAACATCAAAGGAGCAA 967
Query 788 CTATAGTAGATGCCCTGGATACACTTTTTATTATGGAAATGAAACATGAATTTGAAGAAGCAAAATCATGGGTT 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 CTATAGTAGATGCCCTGGATACACTTTTTATTATGGAAATGAAACATGAATTTGAAGAAGCAAAATCATGGGTT 1041
Query 862 GAAGAAAATTTAGATTTTAATGTGAATGCTGAAATTTCTGTCTTTGAAGTAAATATACGCTTTGTTGGTGGACT 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 GAAGAAAATTTAGATTTTAATGTGAATGCTGAAATTTCTGTCTTTGAAGTAAATATACGCTTTGTTGGTGGACT 1115
Query 936 ACTCTCAGCCTACTATCTGTCTGGAGAAGAGATTTTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTAC 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 ACTCTCAGCCTACTATCTGTCTGGAGAAGAGATTTTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTAC 1189
Query 1010 CTGCATTTCATACTCCCTCTGGAATACCTTGGGCATTGCTGAATATGAAAAGGTGG-ATGTGCAA-----TATC 1077
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||.|| |..|
Sbjct 1190 CTGCATTTCATACTCCCTCTGGAATACCTTGGGCATTGCTGAATATGAAAA-GTGGTAT-TGGAAGGAACTGGC 1261
Query 1078 CCAAGGGCTATGGAGGCTACCA-TA------------------------------------------------- 1101
||..||.||.||||||| |.|| ||
Sbjct 1262 CCTGGGCCTCTGGAGGC-AGCAGTATTCTGGCAGAATTTGGAACCCTGCATTTGGAGTTTATGCACTTGAGCCA 1334
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1335 CTTATCAGGAAACCCCATCTTTGCTGAAAAGGTAATGAATATTCGAACAGTACTGAACAAACTGGAAAAACCAC 1408
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1409 AAGGCCTTTATCCTAACTATCTGAATCCCAGTAGTGGACAGTGGGGTCAACATCATGTATCAGTTGGAGGACTT 1482
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1483 GGAGACAGCTTCTATGAGTATTTGCTGAAGGCCTGGTTAATGTCTGACAAGACAGATCTGGAAGCTAAGAAGAT 1556
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1557 GTATTTTGATGCTGTTCAGGCTATCGAGACTCATTTGATCCGCAAGTCTAGCAGCGGACTAACTTATATCGCAG 1630
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1631 AGTGGAAAGGGGGCCTCCTGGAGCACAAGATGGGCCACCTGACCTGCTTCGCGGGGGGCATGTTCGCACTCGGG 1704
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1705 GCTGATGCAGCTCCCGAAGGCATGGCCCAACACTACCTTGAACTCGGGGCTGAAATTGCCCGTACTTGTCATGA 1778
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1779 ATCATATAATCGAACATTTATGAAACTGGGACCAGAAGCTTTCAGATTTGATGGTGGTGTTGAAGCCATCGCTA 1852
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1853 CAAGACAAAATGAAAAATACTACATCTTACGGCCAGAAGTTATGGAGACTTACATGTATATGTGGAGACTGACT 1926
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1927 CATGATCCAAAGTACAGGAAATGGGCCTGGGAAGCCGTAGAGGCCTTGGAAAACCATTGCAGAGTGAATGGAGG 2000
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2001 CTATTCAGGCCTAAGGGATGTTTACCTTCTTCATGAGAGTTATGATGATGTGCAGCAGAGTTTCTTCCTGGCAG 2074
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2075 AGACATTGAAATATTTGTACCTAATATTTTCTGACGACGATCTTCTTCCACTGGAGCATTGGATCTTCAATAGC 2148
Query 1102 ------------------------------------------------------------ 1101
Sbjct 2149 GAGGCACATCTTCTCCCTATCCTCCCTAAAGATAAAAAGGAAGTTGAAATCAGAGAGGAA 2208
