Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10957
Subject:
XM_006512569.3
Aligned Length:
2037
Identities:
918
Gaps:
1008

Alignment

Query    1  ATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGCAGCCCCGCGGGCGGCGTCCTGGGCGGGGGGCTCGGCGG---  71
            ||||||||||||||||||||||||||||||||.|||||.|.||||||||.|||||||.|.||.||.|||||   
Sbjct    1  ATGCCCGTGGGGGGCCTGTTGCCGCTCTTCAGTAGCCCTGGGGGCGGCGGCCTGGGCAGTGGCCTGGGCGGGGG  74

Query   72  ---CGGCGGTGGCAGGAAGGGGTCGGGCCCCGCCGCCCTCCGCCTGACGGAGAAGTTCGTGCTGCTGCTGGTAT  142
               .|||||.||.|||||||||||.||||||||.|||.|||||||.||.|||||||||||||||||||||||.|
Sbjct   75  GCTTGGCGGCGGGAGGAAGGGGTCTGGCCCCGCTGCCTTCCGCCTCACCGAGAAGTTCGTGCTGCTGCTGGTGT  148

Query  143  TCAGCGCCTTCATCACGCTCTGCTTCGGGGCGATCTTCTTCCTGCCAGACTCCTCCAAGCTGCTCAGCGGGGTC  216
            |||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct  149  TCAGCGCCTTCATCACGCTCTGCTTCGGGGCAATCTTCTTCCTGCCTGACTCCTCCAAGCTGCTCAGCGGGGTC  222

Query  217  CTGTTCCACTCCAGCCCCGCCTTGCAGCCGGCCGCCGACCACAAGCCCGGGCCCGGGGCGCGCGCCGAGGACGC  290
            |||||||||||||.|||.||||||||||||.|.||.||.|||||||||||||.|||||||||.||.|||||.||
Sbjct  223  CTGTTCCACTCCAACCCTGCCTTGCAGCCGCCGGCGGAGCACAAGCCCGGGCTCGGGGCGCGTGCGGAGGATGC  296

Query  291  GGCCGAGGGGCGAGCCCGGCGCCGCGAGGAGGGGGCACCCGGGGACCC-GGAGGCCGCCCTGGAGGACAACTTG  363
            .|||||||||.|||.|||||.|||||||||.||.||.||.|||||||| ||| ||.|..|||||.||||||||.
Sbjct  297  CGCCGAGGGGAGAGTCCGGCACCGCGAGGAAGGCGCGCCTGGGGACCCTGGA-GCTGGACTGGAAGACAACTTA  369

Query  364  GCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTGCAGAAGCTGCCCGAGGAGAT  437
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  370  GCCAGGATCCGCGAAAACCACGAGCGGGCTCTCAGGGAAGCCAAGGAGACCCTGCAGAAGCTGCCGGAGGAGAT  443

Query  438  CCAAAGAGACATCCTACTGGAGAAGAAGAAGGTGGCCCAGGACCAGCTGCGTGACAAGGCGCCGTTCAGAGGCC  511
            ||||||||||||.||.|||||||||.|.|||||||||||||||||||||||||||||||..|.|||.||.|||.
Sbjct  444  CCAAAGAGACATTCTGCTGGAGAAGGAAAAGGTGGCCCAGGACCAGCTGCGTGACAAGGATCTGTTTAGGGGCT  517

Query  512  TGCCCCCGGTGGACTTCGTGCCCCCAATCGGGGTGGAGAGCCGGGAGCCCGCCGACGCCGCCATCCGCGAGAAA  585
            |||||..||||||||||.|||||||..|||||||.||||.||||||||||||.||||||.|||||||.|||||.
Sbjct  518  TGCCCAAGGTGGACTTCCTGCCCCCCGTCGGGGTAGAGAACCGGGAGCCCGCTGACGCCACCATCCGTGAGAAG  591

Query  586  AGGGCAAAGATCAAAGAGGAAATTGAAGCCAGGAAGGGGCAAGCAAATTGCCCAGGGTCGAGCAGCTCCTGCGA  659
            ||||||||||||||||                                                          
Sbjct  592  AGGGCAAAGATCAAAG----------------------------------------------------------  607

Query  660  GGTTGAAATCCAGATGATGAAACATGCTTGGAATAATTATAAAGGTTATGCCTGGGGATTAAATGAACTCAAAC  733
                       |||||||||..|||||||||||||||||||||.|.|||||.|||||.||.||.|||||.||||
Sbjct  608  -----------AGATGATGACCCATGCTTGGAATAATTATAAACGCTATGCGTGGGGCTTGAACGAACTGAAAC  670

Query  734  CTATATCAAAAGGAGGCCATTCAAGCAGTTTGTTTGGTAACATCAAAGGAGCAACTATAGTAGATGCCCTGGAT  807
            ||||||||||||.||||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||
Sbjct  671  CTATATCAAAAGAAGGCCATTCAAGCAGTTTGTTTGGCAACATCAAAGGAGCTACAATAGTAGATGCCCTGGAT  744

Query  808  ACACTTTTTATTATGGAAATGAA-ACATGAATTTGAAGAAGCAAAATCATGGGTTGAAGAAAATTTAGATTTTA  880
            ||.|||||.|||||||..||||| || |||||||.|||||||.|||||.|||.||.||.||.||||||||||||
Sbjct  745  ACCCTTTTCATTATGGGCATGAAGAC-TGAATTTCAAGAAGCTAAATCGTGGATTAAAAAATATTTAGATTTTA  817

Query  881  ATGTGAATGCTGAAATTTCTGTCTTTGAAGTAAATATACGCTTTGTTGGTGGACTACTCTCAGCCTACTATCTG  954
            ||||||||||||||.|||||||.||||||||.||.||||||||.||.||||||||.||.||||||||||||.||
Sbjct  818  ATGTGAATGCTGAAGTTTCTGTTTTTGAAGTCAACATACGCTTCGTCGGTGGACTGCTGTCAGCCTACTATTTG  891

Query  955  TCTGGAGAAGAGATTTTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTACCTGCATTTCATACTCCCTC  1028
            ||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  892  TCCGGAGAGGAGATATTTCGAAAGAAAGCAGTGGAACTTGGGGTAAAATTGCTACCTGCATTTCATACTCCCTC  965

Query 1029  TGGAATACCTTGGGCATTGCTGAATATGAAAAGGTGGAT-GTGC---AATATCCCAAGGGCTATGGAGGCTACC  1098
            |||||||||||||||||||||||||||||||||..|||| |.||   |.|..|||..||.||.||||||| |.|
Sbjct  966  TGGAATACCTTGGGCATTGCTGAATATGAAAAGTGGGATCGGGCGGAACTGGCCCTGGGCCTCTGGAGGC-AGC  1038

Query 1099  A-TA----------------------------------------------------------------------  1101
            | ||                                                                      
Sbjct 1039  AGTATCCTGGCCGAATTTGGAACTCTGCATTTAGAGTTTATGCACTTGTCCCACTTATCAGGAGACCCAGTCTT  1112

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1113  TGCCGAAAAGGTTATGAAAATTCGAACAGTGTTGAACAAACTGGACAAACCAGAAGGCCTTTATCCTAACTATC  1186

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1187  TGAACCCCAGTAGTGGACAGTGGGGTCAACATCATGTGTCGGTTGGAGGACTTGGAGACAGCTTTTATGAATAT  1260

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1261  TTGCTTAAGGCGTGGTTAATGTCTGACAAGACAGATCTCGAAGCCAAGAAGATGTATTTTGATGCTGTTCAGGC  1334

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1335  CATCGAGACTCACTTGATCCGCAAGTCAAGTGGGGGACTAACGTACATCGCAGAGTGGAAGGGGGGCCTCCTGG  1408

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1409  AACACAAGATGGGCCACCTGACGTGCTTTGCAGGAGGCATGTTTGCACTTGGGGCAGATGGAGCTCCGGAAGCC  1482

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1483  CGGGCCCAACACTACCTTGAACTCGGAGCTGAAATTGCCCGCACTTGTCATGAATCTTATAATCGTACATATGT  1556

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1557  GAAGTTGGGACCGGAAGCGTTTCGATTTGATGGCGGTGTGGAAGCTATTGCCACGAGGCAAAATGAAAAGTATT  1630

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1631  ACATCTTACGGCCCGAGGTCATCGAGACATACATGTACATGTGGCGACTGACTCACGACCCCAAGTACAGGACC  1704

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1705  TGGGCCTGGGAAGCCGTGGAGGCTCTAGAAAGTCACTGCAGAGTGAACGGAGGCTACTCAGGCTTACGGGATGT  1778

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1779  TTACATTGCCCGTGAGAGTTATGACGATGTCCAGCAAAGTTTCTTCCTGGCAGAGACACTGAAGTATTTGTACT  1852

Query 1102  --------------------------------------------------------------------------  1101
                                                                                      
Sbjct 1853  TGATATTTTCCGATGATGACCTTCTTCCACTAGAACACTGGATCTTCAACACCGAGGCTCATCCTTTCCCTATA  1926

Query 1102  ---------------------------------------  1101
                                                   
Sbjct 1927  CTCCGTGAACAGAAGAAGGAAATTGATGGCAAAGAGAAA  1965

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