Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10962
- Subject:
- NM_001365211.2
- Aligned Length:
- 1506
- Identities:
- 496
- Gaps:
- 987
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
Query 1 ---------------------------------------------------------------------ATG-- 3
|||
Sbjct 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA 222
Query 4 ---GATGAAAG--GAACCGAC-------------AGACTTTAAGAAAGAAAGGCCTTAATGGTTGTGAGAGCCC 59
.||||||| |||||.|| ||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGACTTTAAGAAAGAAAGGCCTTAATGGTTGTGAGAGCCC 296
Query 60 TGATGCTGACGATTACTTTGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGATAGTGATT 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGATGCTGACGATTACTTTGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGATAGTGATT 370
Query 134 TTATTTTCAAACGAGGCCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTATTTTCAAACGAGGCCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGC 444
Query 208 CCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAACGTTAAC 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAACGTTAAC 518
Query 282 AGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGAGACCAC 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGAGACCAC 592
Query 356 CAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTCCA 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTCCA 666
Query 430 GTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA-----TTGGAGCTACTGGTGCAAATA 493
||||| ..|||.|.|..||| |||| ||.|| .|||| ||..||| |||| ||..|
Sbjct 667 GTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGACTTTTAAAGC-ACTG----AACGA 725
Query 494 GCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGAACAGTAGGAAA 567
.||.|||.||.| |||||.|| |||| .|.||.||||
Sbjct 726 ACTCAGGAAAGG---------CAAAGACT-----------------------TCTT--------AAATAAGAAA 759
Query 568 CCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAACACCCAAAGGATC 636
|||.| ||
Sbjct 760 CCAAAGAAAGTC-------------------------------------------------------------- 771
Query 637 AGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAAGCTTGCCTCCGCAAGG 710
Sbjct 772 -------------------------------------------------------------------------- 771
Query 711 ACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCTGACCTGTCAGCCCTTC 784
Sbjct 772 -------------------------------------------------------------------------- 771
Query 785 AAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCACCACCTAGGACAAGCA 858
Sbjct 772 -------------------------------------------------------------------------- 771
Query 859 GCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTAATACCAACCAAAACAT 932
Sbjct 772 -------------------------------------------------------------------------- 771
Query 933 CAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTCCAGCAGCAGCAGCAGC 1006
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1007 AGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCCCCAGCCCCGACAGGAA 1080
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1081 ATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTGATCGGGAGGATCCACG 1154
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1155 GGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAAAGCCCTTCTGTAAAGC 1228
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1229 GAATGAGGATGGACGCGTGGGTGACC 1254
Sbjct 772 -------------------------- 771