Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10962
- Subject:
- XM_005254916.3
- Aligned Length:
- 1529
- Identities:
- 472
- Gaps:
- 1015
Alignment
Query 1 ---------------------------------ATGGATGAAAGGAACCGACAG---ACTTT----AAGA---- 30
||||||||||||||||||||| ||||| ||||
Sbjct 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
Query 31 -------------AAGAAAGGC------CTTAATG------GT---TGTGA----------------------- 53
|||||||.| ||||.|| || |||||
Sbjct 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
Query 54 -------------------------GAGCCCTGATGCTGACGA--TTACTT--------------------TG- 79
.|||.|||||...|||.| || ||| ||
Sbjct 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTT-CTTCTCAAGTATACAGAATATAATGA 221
Query 80 ----------AGCACAGTCCACT---------------CTC----------GGAGGACAGA------------- 105
||||.|..|.||| ||| |||..|||||
Sbjct 222 ACCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCC 295
Query 106 -------------TTCA-----GCAAACT--AAAT---GAAGA---------------TAGTG----ATTTTAT 137
|||| ||.|||| |.|| ||||| ||.|| ||||.||
Sbjct 296 CAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGAT 369
Query 138 TTTCAA-ACGAGGC-----CCT---------------------CCTGGTCTGCCACCTCAGAACTTTTCAATGT 184
|| |.||.|| |.| |||||||||||||||||||||||||||||||
Sbjct 370 ----AATATGATGCGGAATCATAAAATCGCAGTGAGTACTAAACCTGGTCTGCCACCTCAGAACTTTTCAATGT 439
Query 185 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 513
Query 259 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 587
Query 333 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 661
Query 407 CAAATGGAGCTGGAAGCAGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA--- 472
|||||||||||||||||||||||||||| ..|||.|.|..||| |||| ||.|| .||||
Sbjct 662 CAAATGGAGCTGGAAGCAGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGAC 725
Query 473 --TTGGAGCTACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTA 544
||..||| |||| ||..|.||.|||.||.| |||||.||
Sbjct 726 TTTTAAAGC-ACTG----AACGAACTCAGGAAAGG---------CAAAGACT---------------------- 763
Query 545 ATCTTGGAATGAACAGTAGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGC 613
|||| .|.||.|||||||.| ||
Sbjct 764 -TCTT--------AAATAAGAAACCAAAGAAAGTC--------------------------------------- 789
Query 614 CTCCACTAAACACCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACA 687
Sbjct 790 -------------------------------------------------------------------------- 789
Query 688 ACCCCAAGCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGAC 761
Sbjct 790 -------------------------------------------------------------------------- 789
Query 762 CAGCGCTGACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGC 835
Sbjct 790 -------------------------------------------------------------------------- 789
Query 836 AGCAGCACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTA 909
Sbjct 790 -------------------------------------------------------------------------- 789
Query 910 TCCATTAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATC 983
Sbjct 790 -------------------------------------------------------------------------- 789
Query 984 GGGCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCC 1057
Sbjct 790 -------------------------------------------------------------------------- 789
Query 1058 CGCAGCCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGAT 1131
Sbjct 790 -------------------------------------------------------------------------- 789
Query 1132 GGCAGTGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGA 1205
Sbjct 790 -------------------------------------------------------------------------- 789
Query 1206 CAGAGAAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACC 1254
Sbjct 790 ------------------------------------------------- 789