Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11015
• Subject: XM_024446449.1
• Aligned Length: 1452
• Identities: 859
• Gaps: 585

Alignment

Query    1  ATGATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTTCGCAGGGAAGGAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGAGGAATGACTGGACTGTGCAGAATTGTGACCTGGATCAGCAGAGCATTGTTCACATTGTGCAGAGACCGTGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAGGCTGTGAGCGGGAGCC  296
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ---------------ATGAATGCAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAGGCTGTGAGCGGGAGCC  59

Query  297  CCAGAGCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGACTCTGTGGGGCTGGCTGTCATTCTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   60  CCAGAGCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGACTCTGTGGGGCTGGCTGTCATTCTGC  133

Query  371  ACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTTTATGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  134  ACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTTTATGTG  207

Query  445  TATTGTAAAGGCCCCTGTCAAAGAGTGCAGCCGGGGAAACTCAGGGTACAGTGCAGCACCTGCAGGCAGGCAAC  518
            |||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  208  TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCACCTGCAGGCAGGCAAC  281

Query  519  GCTCACCTTGACCCAGGGTCCATCTTGCTGGGATGATGTTTTAATTCCAAACCGGATGAGTGGTGAATGCCAAT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  282  GCTCACCTTGACCCAGGGTCCATCTTGCTGGGATGATGTTTTAATTCCAAACCGGATGAGTGGTGAATGCCAAT  355

Query  593  CCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  356  CCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACA  429

Query  667  TCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGCCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  430  TCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGCCC  503

Query  741  CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGAC  577

Query  815  TCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGGAACTGGAGACACAGTG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  578  TCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTG------------------  633

Query  889  GTGCTTAGAGGAGCTCTGGGGGGATTCAGGAGAGGAGTCGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTCCA  962
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  634  ---------------------------------------GCTGGCTGTCCCAACTCCTTGATTAAAGAGCTCCA  668

Query  963  TCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTGCAGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  669  TCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTGCAGA  742

Query 1037  TGGGGGGCGTGTTATGCCCCCGCCCTGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  743  TGGGGGGCGTGTTATGCCCCCGCCCTGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACC  816

Query 1111  TGCGAAGGGGGCAATGGCCTGGGCTGTGGGTAT-----------GGA---CAACGAAG---AACAAAA------  1161
            |||||||||||||||||||||||||||||||.|           |||   .||.||||   |.||..|      
Sbjct  817  TGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGA  890

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct  891  GTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAGGCCTACAGAGTCGATGAAAGAGCCGCCGAGCAGG  964

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct  965  CTCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTGCCATGTACCAGTG  1038

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1039  GAAAAAAATGGAGGCTGCATGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGG  1112

Query 1162  ----------------------------------------------  1161
                                                          
Sbjct 1113  CTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTG  1158