Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11023
- Subject:
- XM_006517646.3
- Aligned Length:
- 2246
- Identities:
- 421
- Gaps:
- 1777
Alignment
Query 1 ATGGCTCAGCAGACAAGCCCGGACACTTTAACAGTACCTGAAGTGGATAATCCGCATTGTCCAAACCCGTGGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAACGAAGACCTTGTGAAATCCTTGCGAGAAAACCTGTTGCAGCATGAGAAGTCCAAGACAGCGAGGAAATCGG 148
||.|.
Sbjct 1 ---------------------------------------------------------------------ATGGC 5
Query 149 TTTCTCCCAAGCTCTCTCCAGTGATCTCTCCGAGAAATTCCCCCAGGCTTCTGCGCAGAATGCTTCTCAGCAGC 222
||| |.|||..|| |||||..||..| ||||| ||| |||.
Sbjct 6 TTT---------------------TGTCTGGGA-----TCCCCTGGGAGT---CGCAG--TGC-------CAGG 41
Query 223 AACATCCCCA--------AACAGCG---GCGTT--TCACGGTGGCACATACATGTTTTGATGTGGACAATGGCA 283
|.||||.||| |||| .| ||||| |||..|| |.|||| ||||.||||||||||||||||
Sbjct 42 ACCATCTCCAAGAACTAGAACA-AGATTGCGTTTCTCAAAGT----CCTACA-GTTTCGATGTGGACAATGGCA 109
Query 284 CATCTGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGATCCGGGCTAATTCTCCAAGCAAATTTTGTC 357
||||.||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||.||||||
Sbjct 110 CATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAAACTTTGTC 183
Query 358 CACAGTCAACGACGGGAGTCCTTCCTGTATCGATCCGACAGCGATTATGACCTCTCTCCAAAGTCTATGTCCCG 431
|||||||||||.|||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||.|
Sbjct 184 CACAGTCAACGCCGGGAGTCCTTCCTGTACCGATCTGACAGCGACTATGACCTCTCTCCAAAGTCTATGTCCAG 257
Query 432 GAACTCCTCCATTGCCAGTGATATACACGGAGATGACTTGATTGTGACTCCATTTGCTCAGGTCTTGGCCAGTC 505
|||||||||.|||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||||.||.|
Sbjct 258 GAACTCCTCGATTGCCAGTGATATACATGGAGATGACTTGATTGTGACCCCGTTTGCTCAGGTCTTGGCTAGCC 331
Query 506 TGCGAACTGTACGAAACAACTTTGCTGCATTAACTAATTTGCAAGATCGAGCACCTAGCAAAAGATCACCCATG 579
|||||||.|||||.||||||||||||||.|||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 332 TGCGAACCGTACGGAACAACTTTGCTGCGTTAACGAATTTGCAAGACCGAGCACCCAGCAAAAGATCACCCATG 405
Query 580 TGCAACCAACCATCCATCAACAAAGCCACCATAACAG----------------------------GATCCTGGA 625
||||||||||||||||||||||||||||||||.|||| ||.||||||
Sbjct 406 TGCAACCAACCATCCATCAACAAAGCCACCATCACAGAGGAGGCCTACCAGAAACTGGCCAGCGAGACCCTGGA 479
Query 626 -----TGGAAT------TGAACC--------------CATA--------TACGTTACTTGACATG--------- 657
||||.| ||.||| ||.| |.|||.| .|||.|||
Sbjct 480 GGAGCTGGACTGGTGTCTGGACCAGCTAGAGACCCTGCAGACCAGGCACTCCGTCA-GTGAGATGGCCTCCAAC 552
Query 658 -------------------------------------------------------------------------- 657
Sbjct 553 AAGTTCAAAAGGATGCTGAACCGGGAGCTCACGCATCTCTCTGAGATGAGTCGGTCTGGCAACCAGGTGTCGGA 626
Query 658 -------------------------------------------------------------------------- 657
Sbjct 627 GTACATCTCAAACACATTTCTCGATAAGCAACATGAAGTGGAAATCCCCTCTCCAACTCAGAAGGAAAAGGAGA 700
Query 658 -------------------------------------------------------------------------- 657
Sbjct 701 AGAAGAAAAGGCCGATGTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAGCTCCAGCCTAACTAATTCATGT 774
Query 658 -------------------------------------------------------------------------- 657
Sbjct 775 ATCCCCAGGTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGCCAAGGAACTAGAAGATGTGAACAAGTGGGG 848
Query 658 -------------------------------------------------------------------------- 657
Sbjct 849 CCTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAACCGGCCTCTGACTGTTATCATGCACACCATTTTTCAGG 922
Query 658 -------------------------------------------------------------------------- 657
Sbjct 923 AACGAGATTTGTTAAAAACGTTTAAAATCCCAGTAGACACTTTGATTACGTATCTTATGACTCTGGAAGACCAT 996
Query 658 -------------------------------------------------------------------------- 657
Sbjct 997 TACCATGCTGACGTGGCCTATCACAACAACATCCATGCTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCTC 1070
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1071 TACACCCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTCTCGCGGCCATTTTTGCCAGTGCAATACATGATG 1144
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1145 TGGACCATCCTGGGGTGTCAAATCAATTTCTGATCAATACAAACTCGGAACTCGCTCTGATGTACAACGACTCC 1218
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1219 TCGGTCCTAGAGAACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAGAA 1292
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1293 TCTGACCAAAAAGCAAAGACAATCTTTAAGGAAAATGGTCATTGACATTGTCCTGGCGACAGACATGTCGAAGC 1366
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1367 ACATGAACCTGCTGGCTGATCTGAAAACCATGGTTGAAACCAAGAAGGTGACAAGCTCCGGCGTCCTCCTCCTG 1440
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1441 GATAACTACTCCGACAGGATCCAGGTCCTTCAGAATATGGTGCACTGTGCAGACCTGAGCAACCCCACAAAGCC 1514
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1515 ACTCCAGCTGTACCGCCAGTGGACGGACCGGATAATGGAGGAGTTCTTCCGCCAGGGGGACCGAGAGCGGGAGC 1588
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1589 GTGGCATGGAGATAAGTCCCATGTGTGACAAGCACAACGCCTCTGTGGAAAAATCACAGGTGGGCTTCATAGAC 1662
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1663 TATATCGTTCATCCACTCTGGGAGACGTGGGCAGACCTCGTACATCCCGATGCCCAGGACATCTTGGACACTTT 1736
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1737 GGAGGACAATCGTGAGTGGTACCAGAGCACAATCCCCCAGAGCCCCTCCCCTGCACCTGATGACCAAGAGGAGG 1810
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1811 GCCGGCAGGGACAGACTGAAAAATTCCAGTTTGAACTAACCTTGGAGGAAGACTGCGAGTCAGACACTGAAAAG 1884
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1885 GACAGTGGAAGTCAGGTGGAGGAAGACACTAGCTGCAGTGACTCTAAGACTCTGTGCACCCAAGACTCAGAGTC 1958
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1959 CACTGAAATTCCCCTTGACGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTGCG 2032
Query 658 -------------------------- 657
Sbjct 2033 TCCCAGATGACTGCTGTCCTGATACG 2058
