Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11039
- Subject:
- NM_001321051.1
- Aligned Length:
- 2020
- Identities:
- 469
- Gaps:
- 1538
Alignment
Query 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
Query 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
Query 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
Query 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
Query 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
Query 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTA 444
||||||||||||||||||||||||||||||||||||||||||||||||| .|.|.|||
Sbjct 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGG-----GTCTCACT------------ 427
Query 445 TTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATGAAATAAAAAAG--ATC 516
||||.|.|.|| .||..|||||| || | |||
Sbjct 428 -------------CTGTCACACAG-------GCTGGACTGCA-------GT-----------------GGCATC 457
Query 517 CAAGATCTCCTCATGAGCTTTGGTATC-CTTAAACCT----------GACTTAAGGATTGTCTTTGTACATAAC 579
||| ||||| || ||..||||| |.||.|||
Sbjct 458 ----ATC------------TTGGT-TCACTGCAACCTCTGCCTCCCAGGCTCAAG------------------- 495
Query 580 AAGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGTTCTGGGGACTGCTGT 653
Sbjct 496 -------------------------------------------------------------------------- 495
Query 654 TATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCTCAGTGGATTTCTTCCAAAGT 727
Sbjct 496 -------------------------------------------------------------------------- 495
Query 728 GTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCTTCATAAACAGTCGACCAGTA 801
Sbjct 496 -------------------------------------------------------------------------- 495
Query 802 CATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTAAAGGAATCTACTCGTTTGTA 875
Sbjct 496 -------------------------------------------------------------------------- 495
Query 876 TCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTTAACACCAGATAAAAGCCAAG 949
Sbjct 496 -------------------------------------------------------------------------- 495
Query 950 TATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGACTTGTTATGGACCATTACCT 1023
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1024 AGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTTCTTAGTAAAACAGCAGAAAC 1097
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1098 AGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGATACTTCAGTCATTCCATTCC 1171
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1172 AAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATCACCAGATAAGTATTGGTGAC 1245
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1246 TTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGAATGCATTTCAGGACATTTC 1319
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1320 AATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTTTATAAGTTCCGTTAAGCACA 1393
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1394 CCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGGAAGAAGCAGGTCTTGAAAAC 1467
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1468 TCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCAGTGGGAGAGAATATTGAACC 1541
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1542 TGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAATTATCCAATCCCTGAACAAA 1615
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1616 TGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAATCTGGAAAAGTTACAGCTTAT 1689
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1690 GATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTTGTTCAAGATCATCGTCCTCA 1763
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1764 GTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGAAGAACTGTGGAAGACATTGA 1837
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1838 GTGAAGAGGAAAAACTGAATCTTTTTAATGGATCTCATTATTTAGACGTTTTATATAAAATGACAGCAGATGAC 1911
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1912 CAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCGTCTTACAGCGAATGGTTTCAAGATAAAATTGATACC 1985
Sbjct 496 -------------------------------------------------------------------------- 495
Query 1986 AGGAGTTTCAATTACTGAAAAT 2007
Sbjct 496 ---------------------- 495