Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11057
- Subject:
- NM_001310686.2
- Aligned Length:
- 1283
- Identities:
- 744
- Gaps:
- 457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAAAAGCAAGGTGGACAACCAGTTCTACAGTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTACCAGAACCTGAAGCCAATTGGCTCTGGGGCTCAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAATGTGGCCATTAAGAAGCTCAGCAGACCCTTCCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCCTCATGAAGTGTGTGAACCATAAAAACATTATTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGA 296
Query 1 -------------------------ATGGAACTGATGGATGCCAACTTATGTCAAGTGATTCAGATGGAATTAG 49
||||||||||||||.||||||.|.|||||.||||||||||||||..|.|
Sbjct 297 GGAGTTCCAAGATGTCTACTTAGTGATGGAACTGATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGG 370
Query 50 ACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATT 123
||||.|||||.|||||||||.||||||||||.|||.||||||||||.|||||||||||.||.|||||.||.||.
Sbjct 371 ACCACGAGCGGATGTCTTACTTGCTGTACCAGATGCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATC 444
Query 124 CACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGC 197
||||||||.||||||||.||||||||||||||||||||||||||||||.||||||||||.|||||.||||||||
Sbjct 445 CACAGGGACTTAAAACCCAGTAACATTGTAGTCAAGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGC 518
Query 198 CAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCC 271
|||||||||.||.||||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||||||
Sbjct 519 CAGGACAGCGGGTACAAGCTTCATGATGACTCCGTATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCC 592
Query 272 TGGGGATGGGCTACAAGGAGAACGTGGATATATGGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAA 345
||||.|||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 593 TGGGCATGGGCTACAAGGAGAACGTGGACATATGGTCTGTGGGATGCATCATGGGAGAAATGGTTCGCCACAAA 666
Query 346 ATCCTCTTTCCAGGAAGGGACTATATTGACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGA 419
|||||||||||.||||||||||||||||||||||||||.||.||.||.||.||.||||||||.||.||||||||
Sbjct 667 ATCCTCTTTCCCGGAAGGGACTATATTGACCAGTGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGA 740
Query 420 ATTCATGAAGAAATTGCAACCCACAGTAAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCC 493
.|||||||||||||||||.||||||||.||||||||.||||||||||||||||||||.||.|||||||||||||
Sbjct 741 GTTCATGAAGAAATTGCAGCCCACAGTCAGAAACTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCC 814
Query 494 CCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGAC 567
||||.|||||.|||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.
Sbjct 815 CCAAGCTCTTTCCAGATTCCCTCTTCCCAGCGGATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGAT 888
Query 568 TTGTTGTCAAAGATGCTAGTGATTGACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACAT 641
||||||||.||||||.||||||||||||||||.||.||.|||||.|||||||||||..|.||||||||.|||||
Sbjct 889 TTGTTGTCTAAGATGTTAGTGATTGACCCAGCGAAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACAT 962
Query 642 CAACGTCTGGTATGACCCAGCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAG 715
||||||.|||||.|||||.||.|||||||||||||||||.||||||||||||||.||||||.||||||||||.|
Sbjct 963 CAACGTTTGGTACGACCCGGCTGAAGTGGAGGCGCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGG 1036
Query 716 AACACACAATTGAAGAATGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGT 789
|.|||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||.||||||||.|||||.
Sbjct 1037 AGCACACCATCGAAGAATGGAAAGAACTTATCTACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGC 1110
Query 790 GTAGTAAAAGGACAGCCTTCTCCTT-----CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCG 858
|||||.|||||.|||||.||.|||| ||||||||||||
Sbjct 1111 GTAGTCAAAGGCCAGCCCTCGCCTTCAGCACAGGTGCAGCAG-------------------------------- 1152
Query 859 TCTGTCAATGACATCTCCTCCATGTCCACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTC 932
Sbjct 1153 -------------------------------------------------------------------------- 1152
Query 933 GGCAGGACCCCTGGGTTGTTGCAGG 957
Sbjct 1153 ------------------------- 1152