Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11063
- Subject:
- NR_026824.1
- Aligned Length:
- 2026
- Identities:
- 909
- Gaps:
- 1053
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGAAGGAGGAAGGACAGCACAGCCTACAGCCGTGCTCAGGAAGTTTCTGGAACCTAGGCTCATCTCCACAGA 74
Query 1 -------------------------ATGGGAACCCTCTCAGCCCCTCCCTGCACACAGCGCATCAAATGGAAGG 49
|||||..|||||||||||||||||||||||||||.||||||||||||||
Sbjct 75 GGAGAACACACAAGCAGCAGAGACCATGGGGCCCCTCTCAGCCCCTCCCTGCACACAGCACATCAAATGGAAGG 148
Query 50 GGCTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCTGCCCACCACTGCCCAAGTCACGATTGAAGCCGAG 123
||.||||||||||||||||||||||||||||||||||||..||.||||.||||||||||||||.|||||||.||
Sbjct 149 GGGTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCCACCTACCATTGCCCAAGTCACGACTGAAGCCCAG 222
Query 124 CCAACCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACCGGCTACAT 197
|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 223 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGTTACAT 296
Query 198 CTGGTACAAAGGGCAAATGAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTGAAATAATTATAT 271
.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||.|||.|||||.||
Sbjct 297 GTGGTAGAAAGGGCAAATAAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAAGAATTACAT 370
Query 272 ATGGGCCTGCATATGGTGGACGAGAAACAGCATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 345
|||||||||||||..|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGGCCTGCATACAGTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 444
Query 346 GACGCAGGATCCTACACCTTACACATCATAAAGGGAGATGATGGGACTAGAGGAGTAACTGGACGTTTCACCTT 419
||||.||.||||||||||||||||||||||.||.|||.|||||||||||||||||||||||||..|||||||||
Sbjct 445 GACGGAGTATCCTACACCTTACACATCATACAGCGAGGTGATGGGACTAGAGGAGTAACTGGAAATTTCACCTT 518
Query 420 CACCTTACACCTGGAGACTCCTAAGCCCTCCATCTCCAGCAGCAACTTAAATCCCAGGGAGACCATGGAGGCTG 493
|||||||.|
Sbjct 519 CACCTTATA----------------------------------------------------------------- 527
Query 494 TGAGCTTAACCTGTGACCCTGAGACTCCAGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATG 567
Sbjct 528 -------------------------------------------------------------------------- 527
Query 568 ACTCACAGCTTGAAGCTGTCCGAAACCAACAGGACCCTCTTTCTATTGGGTGTCACAAAGTATACTGCAGGACC 641
Sbjct 528 -------------------------------------------------------------------------- 527
Query 642 CTATGAATGTGAAATACGGAACCCAGTGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCCCAAAGC 715
|||.||||
Sbjct 528 ------------------------------------------------------------------CCCGAAGC 535
Query 716 TGTCCAAGCCCTACATCACAATCAACAACTTAAACCCCAGAGAGAATAAGGATGTCTTAACCTTCACCTGTGAA 789
||.||||||||||||||||.||||||||||.|||.|||||.||||||||||||||||||.|||||||||||||.
Sbjct 536 TGCCCAAGCCCTACATCACCATCAACAACTCAAAACCCAGGGAGAATAAGGATGTCTTACCCTTCACCTGTGAC 609
Query 790 CCTAAGAGTGAGAACTACACCTACATTTGGTGGCTAAATGGTCAGAGCCTCCCTGTCAGTCCCAGGGTAAAGCG 863
|||||.|||||||||||||||||||..||||||||||||||||||||||||||.||||||||||||||||||.|
Sbjct 610 CCTAAAAGTGAGAACTACACCTACACGTGGTGGCTAAATGGTCAGAGCCTCCCAGTCAGTCCCAGGGTAAAGTG 683
Query 864 ACCCATTGAAAACAGGATCCTCATTCTACCCAATGTCACGAGAAATGAAACAGGACCTTATCAATGTGAAATAC 937
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||.||||||||||||||||
Sbjct 684 ACCCATTGAAAACAGGATCCTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATAC 757
Query 938 GGGACCGATATGGTGGCATCCGCAGTGACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGCATT 1011
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 758 GGGACCGATATGGTGGCATCCGCAGTAACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT 831
Query 1012 TACCCTTCATTCACCTATTACCGTTCAGGAGAAAACCTCTACTTGTCCTGCTTCGCCGAGTCTAACCCACGGGC 1085
||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||.||.|.||||||||.|||
Sbjct 832 TACCCTTCATTCACCTATTACCGTTCAGGACAAAACCTTTACTTGTCCTGCTTCGCGGAATGTAACCCACCGGC 905
Query 1086 ACAATATTCTTGGACAATTAATGGGAAGTTTCAGCTATCAGGACAAAAGCTCTCTATCCCCCAAATAACTACAA 1159
|.|.||.||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||.|||||||
Sbjct 906 ATAGTACTCTTGGACAATTAATGGGAAGTTTCAGCAATCAGAACAAAAGCTCTTTATCCCCCAAATTACTACAA 979
Query 1160 AGCATAGTGGGCTCTATGCTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATCACAGTC 1233
|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 980 AGCATAGAGGGCTCTATGCTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTC 1053
Query 1234 AAAGTCTCTG---------ACTGGATATTACCC----------------------------------------- 1257
.||||||||| | ||||.| ||
Sbjct 1054 GAAGTCTCTGGTGCCTGCCA-TGGAGA----CCTGGCAGGGTCTCATTCGTGACTGCCATAACAGAGACACTGA 1122
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1123 GAAAAAGATGCAACCATGGAAAGGTGCAAAGGTGGCAAGTTCTAATGACATAGAAAATAGCAATCAGCCTTTCT 1196
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1197 CACATCTGAAAGCCTTCCAAAATATCTGAGTGCAGTAGAGAATTGACAGAGGACTGATCACCAACCTAGAAGTA 1270
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1271 TGCTCCTCCAGGAATAGGACGTCTTCCTTTCTTTACTCCAATAGAGCAGCGGTGATGTCATTTCTGTATTTCAG 1344
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1345 GAAGACTGGCAGGAGATTTATGGAAAAGACTCTGACAAGGACTCTGGAATACAAGCTCCTGATAACTTCAAGAT 1418
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1419 CATACCACTGGACTAAGAACTTTCAAAATTTTAATGAACAGGCTGATACCTTCATGAAATTCAAGACAAAGAAG 1492
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1493 AAAAAAAACTCAATTTTATTGGAATAAATAATCAAAAGGATAATGTTTTCATAATTTTCTATTTGAAAATGTGC 1566
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1567 TGAGTCTTTGAATGTTTTATTCTCCAGATTTATGAACTTTTTTCCTTGAACAATTGGTAAAGTATACTTTTGTA 1640
Query 1258 -------------------------------------------------------------------------- 1257
Sbjct 1641 AACAAAAATTGAAACATTTGCTTTTGCTGAGTGCCCCAGAATTGGGAAACTATTCATGAGTATTCATATGTTTA 1714
Query 1258 ---------------------------- 1257
Sbjct 1715 TGGTAATAAAGTTATTTGCACAACTTCA 1742
