Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11079
- Subject:
- XM_006496444.1
- Aligned Length:
- 2866
- Identities:
- 1579
- Gaps:
- 1100
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGGCGGGGGGAAGCGTCGCAAAAGCAAGAAGCTCGGGCTGTCTGTTTGACCGCAGACTTTGTTCGCATCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAAGTCTGTATTCAGGATGGCTTGTTTGGACAGTGCCAGGCAGGAGTGGGGCAGGCACGGCCCCTCTTACAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCACTTCCCCAGTTCTCCAGCGCCTACAAGGTGTGCTCCGGCAACTCATGTCCCAAGGCTTGTCCTGGCATGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCTTACCCAGCATGTGATCTCCCAGGAGATGGAACGCATCCCCAGGCTTCGCCCCCCAGAGCCCCATCCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACAGGTCTGGTTTGGTGCCCAGGAAACCAGGCCCTGCAGGGGAATTGCTAACTCAGGGCAATCCTACTGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCTCCTGCTGCCCAGGGCTTTCCAAGGCCTGCAGGGGGTGGGGACGGAGCTGGGGCGGGCTCCCCACTGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTGCAGGCTGAGTTGTTACCCCCTCTCTTGGAGCATCTGCTAATGCCCCCACAGCCTCCACACCCTGCTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACCTATGAACCTGCACTGCTACAGCCTTACCTCTTCCACCAGTTTGGCTCCCGAGATGGCTCCCGGGGCTCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGCTCCTCTGGGGTAGTTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCAAGGCCATTTTGGGGACTCACTCTGGACACTCTTTTGGGGACCTTACAGGTCCCTCACCTGCTCAACTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAAGATTCAGGGCTGCTCTACATGGCCCAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAATGGGGGCAACAGGGCAGAGGACTCTTCAGAGGGCCATGAGGAGGAAGTACTAGGGGGTCGTGGGGAGAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCCCTCCCCAAGCAGCACAACCAGAATTGAGTCTGCAGAGATTGACTGCTGTACTGGCAGGCTATGGAGTAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGCGTCAGTTGACCCCGGAGCAGTTTTCTACCCTCTTGACCCTGCTGCAGTTGCTGCCCAAGGGCACAGGAA 1036
Query 1 ------------------------ATGGAGGGGCCGGTG-------------------------GAGGGCAGAG 25
.||||||.||||.|| |||.| |||
Sbjct 1037 GAAATCTTGAAGGGGCTGTAAATGTTGGAGGAGCCGATGTCAAGAAAACAATACAACAGATGCAGAGAG--GAG 1108
Query 26 ACACAGCAG-AGCTTCCAG-CCCGCACATCCCCCATGCCTGGACACCCCACTGCCAGCCCTACCTCCAGTGAAG 97
||.|||||| |||| |.| |||.||||.||.|..|.|||||..|||.|||||||||||||.|||||||.||||
Sbjct 1109 ACCCAGCAGAAGCT--CTGCCCCCCACACCCTCGCTTCCTGGGTACCTCACTGCCAGCCCTGCCTCCAGCGAAG 1180
Query 98 TCCAGCAGGTGCCAAGCCCT-GTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACACCT-----GTC 165
|.||||||||||..|||||| ||.||| ||||.||||||.|..|..|||| |||.||| |.|.||| |||
Sbjct 1181 TTCAGCAGGTGCTGAGCCCTGGTTTCC-CTGAACCTCCCCACACACCCAG-CCCTCTG-GGCTCCTCCTCAGTC 1251
Query 166 CTGCTAGAGAAGAAAAGCCCACTGGGCCAGAGCCAGCCCACGGTGGCAGGACAGCCCTCAGCCCGCCCAGCAGC 239
||.||.|||||||||||.||..|||||||||||||||||||.||||..||||.|||.|||||.||.|||.|.||
Sbjct 1252 CTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCGACCATCGGC 1325
Query 240 AGAGGAATATGGCTACATCGTCACTGATCAGAAGCCCCTGAGCCTGGCTGCAGGAGTGAAGCTGCTGGAGATCC 313
.|||||.||||||||.|||||||||||.|||||.|||||||||||||..||.|||||||.||||||||||||.|
Sbjct 1326 CGAGGAGTATGGCTATATCGTCACTGACCAGAAACCCCTGAGCCTGGTGGCTGGAGTGAGGCTGCTGGAGATTC 1399
Query 314 TGGCTGAGCATGTGCACATGTCCTCAGGCAGCTTCATCAACATCAGTGTGGTGGGACCAGCCCTCACCTTCCGC 387
||||||||||.|||||.||||||||.||.|||||.||||||||||||||||||||||||||..||||||||||.
Sbjct 1400 TGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGGACCAGCTGTCACCTTCCGA 1473
Query 388 ATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAAGTCTGAACTGGA 461
||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||
Sbjct 1474 ATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAAGTCTGAACTGGA 1547
Query 462 AGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTCCCCAAA 535
|||.||||||||||||||.||.|||||||||||.|||||||||||||||||.|||||||.|||||||||||.|.
Sbjct 1548 AGCGCAGACAGGGCTCCAGATTTTGCAGACAGGGGTGGGACAGAGGGAGGAAGCAGCTGAAGTCCTTCCCCGAC 1621
Query 536 CTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGCTCACTCTGGTGGCCCTGGCAGGTGTGGCTGGGCTGCTG 609
..||.||..|||..||.||||||||||||||||||||.|||||.||||||||||||||.||.|||||||||||.
Sbjct 1622 AAGCCCATGGCATATCTCCCATGCGCTCAGTGCTGCTTACTCTAGTGGCCCTGGCAGGCGTCGCTGGGCTGCTA 1695
Query 610 GTGGCTCTGGCTGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGCCCTGGG 683
||||||.||||.|||||..|||||.||||.||.|||.||.|.||||..||.|||||||||||||||||.|||||
Sbjct 1696 GTGGCTTTGGCAGTGGCCTTGTGTATGCGCCATCATTCGAGACAGCGGGATAAGGAGCGCCTGGCAGCGCTGGG 1769
Query 684 GCCTGAGGGGGCCCATGGTGACACTACCTTTGAGTACCAGGACCTGTGCCGCCAGCACATGGCCACGAAGTCCT 757
|||.|||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||||||.
Sbjct 1770 GCCGGAGGGGGCCCATGGTGACACTACTTTTGAGTACCAGGACCTGTGTCGCCAGCACATGGCCACAAAGTCCC 1843
Query 758 TGTTCAACCGGGCAGAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCAGCC 831
||||.||||||||.|||||||..||.||||||||..||||||||||||||||||||||||||||||||||.|||
Sbjct 1844 TGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCGGCC 1917
Query 832 CAGGCCAGCCCCAGCTCCCACAGCAGCACCCCGTCCTGGTGCGAGGAGCCGGCCCAAGCCAACATGGACATCTC 905
||||||||||||||.||||||||||||||.||.||.||||||||||||||.|||||.|||||||||||||||||
Sbjct 1918 CAGGCCAGCCCCAGTTCCCACAGCAGCACACCATCTTGGTGCGAGGAGCCCGCCCAGGCCAACATGGACATCTC 1991
Query 906 CACGGGACACATGATTCTGGCATACATGGAGGATCACCTGCGGAACCGGGACCGCCTTGCCAAGGAGTGGCAGG 979
|||.|||||||||||||||||||||||||||||||||||.||||||||||||||..|.||||||||||||||||
Sbjct 1992 CACAGGACACATGATTCTGGCATACATGGAGGATCACCTTCGGAACCGGGACCGGTTGGCCAAGGAGTGGCAGG 2065
Query 980 CCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCGG 1053
|.||.||.||||||||||||||||||||||||||||||.||||.||||..|||.||||||||||.||||||||.
Sbjct 2066 CTCTGTGCGCCTACCAAGCAGAGCCAAACACCTGTGCCGCCGCACAGGATGAGAGCAACATCAAGAAGAACCGC 2139
Query 1054 CATCCTGACTTCCTGCCCTATGACCATGCCCGCATAAAACTGAAGGTGGAGAGCAGCCCTTCTCGGAGCGATTA 1127
||||||||||||||.|||||||||||||||||.||.||.|||||.|||||||||||||||||||||||.|||||
Sbjct 2140 CATCCTGACTTCCTACCCTATGACCATGCCCGAATCAAGCTGAAAGTGGAGAGCAGCCCTTCTCGGAGTGATTA 2213
Query 1128 CATCAACGCCAGCCCCATTATTGAGCATGACCCTCGGATGCCAGCCTACATAGCCACGCAGGGCCCGCTGTCCC 1201
||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||.|||||.||.|||||||
Sbjct 2214 CATCAACGCCAGCCCCATCATCGAGCATGACCCTCGGATGCCGGCCTACATAGCCACACAGGGACCACTGTCCC 2287
Query 1202 ATACCATCGCAGACTTCTGGCAGATGGTGTGGGAGAGCGGCTGCACCGTCATCGTCATGCTGACCCCGCTGGTG 1275
|.||||||||.||||||||||||||||||||||||||.||||||||.||||||||.||||||||||||.|||||
Sbjct 2288 ACACCATCGCGGACTTCTGGCAGATGGTGTGGGAGAGTGGCTGCACTGTCATCGTTATGCTGACCCCGTTGGTG 2361
Query 1276 GAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTGAA 1349
|||||.||||||||.||||||||||||||||||||.|||||.||..|.||||||||||||||.|||||||||||
Sbjct 2362 GAGGACGGTGTCAAACAGTGTGACCGCTACTGGCCGGATGAAGGATCTTCCCTCTACCACGTCTATGAGGTGAA 2435
Query 1350 CCTGGTGTCGGAGCACATCTGGTGCGAGGACTTTCTGGTGCGGAGCTTCTACCTGAAGAACGTGCAGACCCAGG 1423
|||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||||||||||||
Sbjct 2436 CCTGGTGTCGGAGCACATCTGGTGCGAGGACTTCCTGGTGCGGAGCTTCTACCTTAAGAACCTGCAGACCCAGG 2509
Query 1424 AGACGCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCCTCCACGCGGCCCCTG 1497
||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||
Sbjct 2510 AGACGCGCACGCTCACTCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACTCCGGCCTCCACCCGGCCGCTG 2583
Query 1498 CTGGACTTCCGCAGGAAGGTGAACAAGTGCTACCGGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTGATGG 1571
|||||||||||||||||.|||||||||||||||.|.||||||||||||||||||||.||||||||||||||.||
Sbjct 2584 CTGGACTTCCGCAGGAAAGTGAACAAGTGCTACAGAGGCCGCTCCTGCCCCATCATAGTGCACTGCAGTGACGG 2657
Query 1572 TGCGGGGAGGACCGGCACCTACATCCTCATCGACATGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAGATTG 1645
|||.||||||||.||||||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||||
Sbjct 2658 TGCAGGGAGGACAGGCACCTACATCCTTATTGACATGGTCCTGAATCGCATGGCCAAAGGAGTGAAGGAGATTG 2731
Query 1646 ACATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGTCCGCTCTAAGGACCAGTTTGAATTT 1719
|.||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||
Sbjct 2732 ATATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGTCCGTTCTAAGGACCAGTTTGAGTTT 2805
Query 1720 GCCCTGACAGCCGTGGCGGAGGAAGTGAATGCCATCCTCAAGGCCCTGCCCCAG 1773
||.||||||||||||||.|||||.||||||||.|||||||||||||||||||||
Sbjct 2806 GCGCTGACAGCCGTGGCAGAGGAGGTGAATGCTATCCTCAAGGCCCTGCCCCAG 2859
