Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11113
- Subject:
- NM_001007596.2
- Aligned Length:
- 2111
- Identities:
- 553
- Gaps:
- 1492
Alignment
Query 1 ATGGAAACTGCATCCACAGGTGTGGCAGGTGTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGGGAAGGATCGTGTTACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCTACATATTTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTGGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCTGAGGAGCTGGGTACACCCGGCCCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGCTTATTTAGTTCTGATTCTGGAATAGAGATGACTCCTGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGAGTCCACGGAAGTGAACAAGATCTTAGCAGACCCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACATAACCAGACCCGAGGAGGTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTGGACTTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGAATAAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGACAAACCAGCTCCTGTGGAGGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTTGCTCCATACATAGATGATCTCTCTGAAGAACAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCAGGGCTCCTCAGATCACCACCCCTGTCAAAATCACACTGACGGAAATAGAACCTTCTGTTGAAACCACTACC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAAGAGAAGACCCCTGAGAAGCAAGATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTCTC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGCCTGAAGACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAATCCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATCAAAGAAGCAAAGGGATTATCGTATGAAACC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCCGAGAACCCACGGCCGGTGGGCCAGCTGGCCGACAGGCCCGAGGTCAAGGCCAGGTCCGGACCGCCAACCAT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CCCCAGCCCCCTGGACCACGAGGCCAGCAGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CCATGGCCGCGGAGGACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCGCCGCCCTCGCCC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCCGAGCTGGACAGCGAGCTCATCATCGA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGCCCCAAGCGGGAGCAGGACTCACCCCCGATGAAGCCCAGCG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCCTGGATGCCATCCGGGAGGAGACTGGCGTCCGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAG 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 CCGGGTTCCTTCCTCGACTACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGACGGAGCCCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GGAGCCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACT--CGAGTTCCAACCAAAGTCCTGCGGCCAC 1478
|.|.|.||| ||| ||| ||||| |||.
Sbjct 1 ------------------------ATGCAGGCC--------ACTGCCGA-TTCCA---------------CCAA 26
Query 1479 AAAGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCACTGCTGTTTCTCAATAAGCAAA---AAGCTATTG 1549
.|.||.|..||.| |||.| |.|||| |.||| |.|||||||
Sbjct 27 GATGGACTGTGTG-----------TGGAG--------CAACTG--------------GAAAAGTCAGGCTATTG 67
Query 1550 ACCTGTTGTATTGGCGGGACATCAAGCAGACGGGCATCGTGTTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTG 1623
||||..||||.||||||||||||||||||||.||.||.|||||.|||||.||||||||||||||||||||||||
Sbjct 68 ACCTTCTGTACTGGCGGGACATCAAGCAGACTGGGATTGTGTTCGGGAGCTTCCTGCTGCTGCTCTTCTCCCTG 141
Query 1624 ACCCAGTTCAGCGTGGTGAGCGTCGTGGCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGCAT 1697
||||||||||||||.|||||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||
Sbjct 142 ACCCAGTTCAGCGTTGTGAGCGTCGTTGCCTACCTGGCCCTGGCCGCCCTCTCTGCCACCATCAGCTTCCGCAT 215
Query 1698 CTACAAGTCTGTTTTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTCAAGGCCTACTTGGAGCTTGAGA 1771
|||||||||.|||.|||||||.|||||||||||.||.||.||.||||||||||||||||||.|||||||.||||
Sbjct 216 CTACAAGTCCGTTCTACAAGCTGTGCAGAAAACAGATGAGGGTCACCCTTTCAAGGCCTACCTGGAGCTGGAGA 289
Query 1772 TCACCCTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAGTTCTACGTGAACAGCACACTTAAGGAA 1845
|||||||.||.|||||||||||.|||||||||||.||||||||||||.|.||.|||||||||||.||.|||||.
Sbjct 290 TCACCCTGTCCCAGGAGCAGATCCAGAAGTACACAGACTGCCTGCAGCTGTATGTGAACAGCACTCTGAAGGAG 363
Query 1846 CTGAGGAGGCTCTTCCTTGTCCAGGACCTGGTGGATTCTTTAAAATTTGCAGTCCTGATGTGGCTCCTGACCTA 1919
||..|||||||.|||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||
Sbjct 364 CTACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTCCTTAAAATTTGCAGTCCTCATGTGGCTCCTGACCTA 437
Query 1920 CGTTGGCGCTCTCTTCAATGGCCTGACCCTGCTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTGTAGTGT 1993
|||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||
Sbjct 438 CGTTGGCGCGCTCTTCAATGGCCTGACCCTGCTGCTTATGGCTGTGGTTTCGATGTTTACTCTACCTGTTGTGT 511
Query 1994 ATGTTAAGCACCAGGCACAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTTGTGGCAAAG 2067
|.|||||||||||||||||..|||||||||||||||||||||||||||||||||||||..|.||.|||||||||
Sbjct 512 ACGTTAAGCACCAGGCACAAGTTGACCAATATCTGGGACTTGTGAGGACTCACATAAACACCGTCGTGGCAAAG 585
Query 2068 ATTCAGGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAG 2106
||.||||||||||||||.|||||.|||||||||||||||
Sbjct 586 ATCCAGGCTAAAATCCCCGGCGCCAAGAGGCACGCTGAG 624
