Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11113
- Subject:
- NM_001363702.1
- Aligned Length:
- 2106
- Identities:
- 573
- Gaps:
- 1527
Alignment
Query 1 ATGGAAACTGCATCCACAGGTGTGGCAGGTGTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGGGAAGGATCGTGTTACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCTACATATTTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTGGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCTGAGGAGCTGGGTACACCCGGCCCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGCTTATTTAGTTCTGATTCTGGAATAGAGATGACTCCTGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGAGTCCACGGAAGTGAACAAGATCTTAGCAGACCCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACATAACCAGACCCGAGGAGGTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTGGACTTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGAATAAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGACAAACCAGCTCCTGTGGAGGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTTGCTCCATACATAGATGATCTCTCTGAAGAACAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCAGGGCTCCTCAGATCACCACCCCTGTCAAAATCACACTGACGGAAATAGAACCTTCTGTTGAAACCACTACC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAAGAGAAGACCCCTGAGAAGCAAGATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTCTC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGCCTGAAGACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAATCCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATCAAAGAAGCAAAGGGATTATCGTATGAAACC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCCGAGAACCCACGGCCGGTGGGCCAGCTGGCCGACAGGCCCGAGGTCAAGGCCAGGTCCGGACCGCCAACCAT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CCCCAGCCCCCTGGACCACGAGGCCAGCAGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CCATGGCCGCGGAGGACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCGCCGCCCTCGCCC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCCGAGCTGGACAGCGAGCTCATCATCGA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGCCCCAAGCGGGAGCAGGACTCACCCCCGATGAAGCCCAGCG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCCTGGATGCCATCCGGGAGGAGACTGGCGTCCGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAG 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 CCGGGTTCCTTCCTCGACTACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGACGGAGCCCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GGAGCCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACTCGAGTTCCAACCAAAGTCCTGCGGCCACAA 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 AGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCACTGCTGTTTCTCAATAAGCAAAAAGCTATTGACCTG 1554
.|||..||||| |..|||||||||||||
Sbjct 1 --------------------------------------ATGCCATTTCT---------ACCAGCTATTGACCTG 27
Query 1555 TTGTATTGGCGGGACATCAAGCAGACGGGCATCGTGTTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTGACCCA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28 TTGTATTGGCGGGACATCAAGCAGACGGGCATCGTGTTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTGACCCA 101
Query 1629 GTTCAGCGTGGTGAGCGTCGTGGCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGCATCTACA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 102 GTTCAGCGTGGTGAGCGTCGTGGCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGCATCTACA 175
Query 1703 AGTCTGTTTTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTCAAGGCCTACTTGGAGCTTGAGATCACC 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 AGTCTGTTTTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTCAAGGCCTACTTGGAGCTTGAGATCACC 249
Query 1777 CTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAGTTCTACGTGAACAGCACACTTAAGGAACTGAG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 CTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAGTTCTACGTGAACAGCACACTTAAGGAACTGAG 323
Query 1851 GAGGCTCTTCCTTGTCCAGGACCTGGTGGATTCTTTAAAATTTGCAGTCCTGATGTGGCTCCTGACCTACGTTG 1924
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 324 GAGGCTCTTCCTTGTCCAGGACCTGGTGGATTCCTTAAAATTTGCAGTCCTGATGTGGCTCCTGACCTACGTTG 397
Query 1925 GCGCTCTCTTCAATGGCCTGACCCTGCTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTGTAGTGTATGTT 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 398 GCGCTCTCTTCAATGGCCTGACCCTGCTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTGTAGTGTATGTT 471
Query 1999 AAGCACCAGGCACAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTTGTGGCAAAGATTCA 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 AAGCACCAGGCACAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTTGTGGCAAAGATTCA 545
Query 2073 GGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAG 2106
||||||||||||||||||||||||||||||||||
Sbjct 546 GGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAG 579
