Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11113
• Subject: XM_011537063.3
• Aligned Length: 2339
• Identities: 1613
• Gaps: 712

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCGCGCCGGGGGATCCGCAGGACGAGCTGCTGCCGCTGGCCGGCCCCGGGTCCCAGTGGCTCAGGCACCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGGGAGGGGGAGAACGAAGCGGTGACGCCGAAAGGGGCCACGCCGGCGCCGCAGGCTGGGGAGCCCAGCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGTTGGGCGCCAGGGCCCGGGAAGCGGCGTCGCGGGAAGCCGGCTCGGGCCCCGCCCGGCAGTCGCCCGTTGCC  222

Query    1  ATGGAAACTGCATCCACAGGTGTGGCAGGTGTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGGAAACTGCATCCACAGGTGTGGCAGGTGTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGA  296

Query   75  TGGGGAAGGATCGTGTTACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCTACATATTTTA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGGGAAGGATCGTGTTACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCTACATATTTTA  370

Query  149  CTGGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCTGAGGAGCTGGGTACACCCGGCCCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCTGAGGAGCTGGGTACACCCGGCCCC  444

Query  223  TCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGCTTATTTAGTTCTGATTCTGGAATAGAGATGACTCCTGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGCTTATTTAGTTCTGATTCTGGAATAGAGATGACTCCTGC  518

Query  297  AGAGTCCACGGAAGTGAACAAGATCTTAGCAGACCCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGAGTCCACGGAAGTGAACAAGATCTTAGCAGACCCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTG  592

Query  371  ACATAACCAGACCCGAGGAGGTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTGGACTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACATAACCAGACCCGAGGAGGTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTGGACTTT  666

Query  445  AAGAATAAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGACAAACCAGCTCCTGTGGAGGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGAATAAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGACAAACCAGCTCCTGTGGAGGG  740

Query  519  AAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTTGCTCCATACATAGATGATCTCTCTGAAGAACAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTTGCTCCATACATAGATGATCTCTCTGAAGAACAGC  814

Query  593  GCAGGGCTCCTCAGATCACCACCCCTGTCAAAATCACACTGACGGAAATAGAACCTTCTGTTGAAACCACTACC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCAGGGCTCCTCAGATCACCACCCCTGTCAAAATCACACTGACGGAAATAGAACCTTCTGTTGAAACCACTACC  888

Query  667  CAAGAGAAGACCCCTGAGAAGCAAGATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTCTC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAAGAGAAGACCCCTGAGAAGCAAGATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTCTC  962

Query  741  GGAGCCTGAAGACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAATCCC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGAGCCTGAAGACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAATCCC  1036

Query  815  AGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATCAAAGAAGCAAAGGGATTATCGTATGAAACC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATCAAAGAAGCAAAGGGATTATCGTATGAAACC  1110

Query  889  GCCGAGAACCCACGGCCGGTGGGCCAGCTGGCCGACAGGCCCGAGGTCAAGGCCAGGTCCGGACCGCCAACCAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCCGAGAACCCACGGCCGGTGGGCCAGCTGGCCGACAGGCCCGAGGTCAAGGCCAGGTCCGGACCGCCAACCAT  1184

Query  963  CCCCAGCCCCCTGGACCACGAGGCCAGCAGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCCCAGCCCCCTGGACCACGAGGCCAGCAGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACC  1258

Query 1037  CCATGGCCGCGGAGGACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCGCCGCCCTCGCCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCATGGCCGCGGAGGACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCGCCGCCCTCGCCC  1332

Query 1111  GCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCCGAGCTGGACAGCGAGCTCATCATCGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCCGAGCTGGACAGCGAGCTCATCATCGA  1406

Query 1185  GTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGCCCCAAGCGGGAGCAGGACTCACCCCCGATGAAGCCCAGCG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGCCCCAAGCGGGAGCAGGACTCACCCCCGATGAAGCCCAGCG  1480

Query 1259  CCCTGGATGCCATCCGGGAGGAGACTGGCGTCCGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCCTGGATGCCATCCGGGAGGAGACTGGCGTCCGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAG  1554

Query 1333  CCGGGTTCCTTCCTCGACTACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGACGGAGCCCT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CCGGGTTCCTTCCTCGACTACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGACGGAGCCCT  1628

Query 1407  GGAGCCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACTCGAGTTCCAACCAAAGTCCTGCGGCCACAA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGAGCCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACTCGAGTTCCAACCAAAGTCCTGCGGCCACAA  1702

Query 1481  AGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCACTGCTGTTTCTCAATAAGCAAAAAGCTATTGACCTG  1554
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||      
Sbjct 1703  AGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCACTGCTGTTTCTCAATAAGCAAAAAGACATT------  1770

Query 1555  TTGTATTGGCGGGACATCAAGCAGACGGGCAT-CGTGTTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTGACCC  1627
                                          || |||||....|||.|            |||||       |||
Sbjct 1771  ------------------------------ATACGTGTACAAGAGAT------------TCTTC-------CCC  1795

Query 1628  A------GTTCAGCGTGGTGAGCGTCGTGGCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGC  1695
            |      |||||                                 ||||||             |.|.||.|  
Sbjct 1796  AAAAATCGTTCA---------------------------------CCGCAC-------------CTGATTGC--  1821

Query 1696  ATCTACAAGTCTGTTTTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTC----AAGGCCTACTTGGAGC  1765
                   ||| |||.|||       ||  |||                   |||    ||||   |.||.||| 
Sbjct 1822  -------AGT-TGTCTTA-------TG--GAA-------------------TTCAAGAAAGG---AATTAGAG-  1855

Query 1766  TTGAGATCACCCTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAGTTCTACGTGAACAGCACACTT  1839
                  ||||.                                                               
Sbjct 1856  ------TCACA---------------------------------------------------------------  1860

Query 1840  AAGGAACTGAGGAGGCTCTTCCTTGTCCAGGACCTGGTGGATTCTTTAAAATTTGCAGTCCTGATGTGGCTCCT  1913
                                                                                      
Sbjct 1861  --------------------------------------------------------------------------  1860

Query 1914  GACCTACGTTGGCGCTCTCTTCAATGGCCTGACCCTGCTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTG  1987
                                                                                      
Sbjct 1861  --------------------------------------------------------------------------  1860

Query 1988  TAGTGTATGTTAAGCACCAGGCACAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTTGTG  2061
                                                                                      
Sbjct 1861  --------------------------------------------------------------------------  1860

Query 2062  GCAAAGATTCAGGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAG  2106
                                                         
Sbjct 1861  ---------------------------------------------  1860