Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11131
- Subject:
- XR_877675.2
- Aligned Length:
- 2381
- Identities:
- 785
- Gaps:
- 1505
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCATGTGACCCGGTCCGACGTGGTGTCGCCTCCTCTCGAGGAGGCGGTGGCGTCTTCGGCTGTGCGTCGAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCCGCGGCCGCTCATGAGCAGCCAGGGCCGCTCGGGTCCCCCCGGGAACCGCGGGCCCAGGGAAGGCGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGGGAGGCGAGGAAACTGCAGGAGGCGAGGGTCGCGCGGGGAAAGCAAGGGAAAGGGAAAGGGAAGGGGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGGTACCGGGCACGGCGGAAGAGGAAGCGGGGCGGAAGGAAAGCCGGGCCTGCAGCCGGAGAGGAAGGCAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGCCGGCGGCTGAGGCAGGCCGGGGACAGGAAGGCGAGGGAGGCGAGGAGGAAAGGCCGAGAAGCTCCGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCGGGATGAGGGCAGCGCAGAGCCGGGGAAGGAGGAGCGGAGGGTCGGGGCCGGGCGGCGGGAGGACGACAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGAGAGAGGACAGGAGCAGGGACCTCAGGCGTGCGGCGGCATCCCGGGAACCCGGACGGCCATGGCGGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCGGCGGAGGATGCCGCAGCGGCGGCCGTGGAGCCGGCCACCCGTCCGGCCGCGGGGCCCGCGCTCTGGCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCCGGAGGAGCTGCTGCTGCTCATCTGCTCCTACCTCGACACGCGGGCCCTCGGCCGCCTGGCCCAAGTCTGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCTGGCTGCGGCGCTTCACCAGCTGCGACCTGCTCTGGCGCCCGATAGCCCGGGCCTCGCTCAACACCGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACGCGGCTCGGCACCGACCTCATGGCAGGCATTCCAGTAAAGGAGCGCGTGAAACTGTCTCAGAACTGGCGGC 814
Query 1 -----------------------------------------------ATGCCCTGGATGCAGCTAGAGGATGAT 27
|||||.||||||||||||.||||||.|
Sbjct 815 TGGGGCGCTGCCGAGATCGGATTCTGCTGAAGTGGAGATATAGTCAGATGCCTTGGATGCAGCTACAGGATGCT 888
Query 28 TCTCTGTACATATCCCAGGCTAATTTCATCCTGGCCTACCAGTTCCGTCCAGATGGTGCCAGCTTGAATCGTCG 101
|||||||||.||||.||||||||||||||||||||||||||||||||.||.||||||||.||||||||.||.||
Sbjct 889 TCTCTGTACCTATCACAGGCTAATTTCATCCTGGCCTACCAGTTCCGCCCGGATGGTGCAAGCTTGAACCGACG 962
Query 102 GCCTCTGGGAGTCTTTGCTGGGCATGATGAGGACGTTTGCCACTTTGTGCTGGCCAACTCGCATATTGTTAGTG 175
|||..|..|||||||..|||||||||||||||||||.||.||||||||||||||||||||.||.||.||.||||
Sbjct 963 GCCCTTCAGAGTCTTCTCTGGGCATGATGAGGACGTCTGTCACTTTGTGCTGGCCAACTCCCACATCGTCAGTG 1036
Query 176 CAGGAGGGGATGGGAAGATTGGCATTCATAAGATTCACAGCACCTTCACTGTCAAGTACTCGGCTCATGAACAG 249
|||||||.||.||||||||.||..||||.|||||.||||||||||||||||||||||||||||||||.||.|||
Sbjct 1037 CAGGAGGAGACGGGAAGATCGGTGTTCACAAGATCCACAGCACCTTCACTGTCAAGTACTCGGCTCACGAGCAG 1110
Query 250 GAGGTGAACTGTGTGGATTGCAAAGGGGGCATCATTGTGAGTGGCTCCAGGGACAGGACGGCCAAGGTGTGGCC 323
|||||||||||||||||.||.|||||.|||||||||||||||||||||.||||||||||.||||||||.|||||
Sbjct 1111 GAGGTGAACTGTGTGGACTGTAAAGGTGGCATCATTGTGAGTGGCTCCCGGGACAGGACAGCCAAGGTATGGCC 1184
Query 324 TTTGGCCTCAGGCCGGCTGGGGCAGTGCTTACACACCATCCAGACTGAAGACCGAGTCTGGTCCATTGCTATCA 397
|.|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1185 TCTGGCCTCGGGCCGGCTGGGGCAGTGCTTACACACCATCCAGACCGAAGACCGAGTCTGGTCCATTGCTATCA 1258
Query 398 GCCCATTACTCAGCTCTTTTGTGACAGGGACGGCTTGTTGCGGGCACTTCTCACCCCTGAGAATCTGGGACCTC 471
|||||||||||||||||||||||||.||.||.||||||||.||||||||||||||.||||||||||||||||||
Sbjct 1259 GCCCATTACTCAGCTCTTTTGTGACTGGAACAGCTTGTTGTGGGCACTTCTCACCTCTGAGAATCTGGGACCTC 1332
Query 472 AA------------------------------------------------------------------------ 473
||
Sbjct 1333 AACAGCAGGGTGAGCCAGGTCCAGGAGCCCTGCCTTCTGTTCTGAGAGACTCCTCAGGGAGATGGTCCCACTTA 1406
Query 474 -----------------CAGTGGGCAGCTGATGACACACTTGGGCAGTGACTTTCCCCCAGGGGCTGGGGTGCT 530
|||||||||||||||.|||||..||||||||||||||||||||||||||||||||||
Sbjct 1407 GCTTGCTTCTTCCTGCCCAGTGGGCAGCTGATCACACATCTGGGCAGTGACTTTCCCCCAGGGGCTGGGGTGCT 1480
Query 531 GGATGTCATGTATGAGTCCCCTTTCACACTGCTGTCCTGTGGCTATGACACCTATGTTCGCTACTGGGACCTCC 604
.||||||||||||||||||||.|..|||||||||||||||||.||||||||||||||||||||.||||||||||
Sbjct 1481 AGATGTCATGTATGAGTCCCCCTCTACACTGCTGTCCTGTGGTTATGACACCTATGTTCGCTATTGGGACCTCC 1554
Query 605 GCACCAGCGTCCGGAAATGTGTCATGGAGTGGGAGGAGCCCCACGACAGCACCCTGTACTGCCTGCAGACAGAT 678
||||.||....|||||||||||||||||||||||||||||.||.|||||.|||.|.||||||||.||||||||.
Sbjct 1555 GCACAAGTACACGGAAATGTGTCATGGAGTGGGAGGAGCCTCATGACAGTACCTTCTACTGCCTACAGACAGAC 1628
Query 679 GGCAACCACCTGCTGGCCACAGGTTCCTCCTACTACGGTGTTGTACGGCCGTGGGACCGGCGTCAAAGGGCCTG 752
|||||||||||||||||||||||.|||||||||||||||.|.||.||||.|||||||||.||.||..||||.||
Sbjct 1629 GGCAACCACCTGCTGGCCACAGGCTCCTCCTACTACGGTCTCGTGCGGCTGTGGGACCGACGCCAGCGGGCTTG 1702
Query 753 CCTGCACGCCTTCCCGCTGACGTCGACTCCCCTCAGCAGCCCTGTGTACTGCCTGCGTCTCACCACCAAGCATC 826
||||||.||||||.|..||||||||||.||.||||||||||||||||||||||||||..|||||||.|.|||||
Sbjct 1703 CCTGCATGCCTTCTCATTGACGTCGACCCCACTCAGCAGCCCTGTGTACTGCCTGCGGTTCACCACTAGGCATC 1776
Query 827 TCTATGCTGCCCTGTCTTACAACCTCCACGTCCTGGATTTTCAAAACCCA------------------------ 876
||||||||||.|||||||||||||||||||||.|.||.|||||.||||||
Sbjct 1777 TCTATGCTGCGCTGTCTTACAACCTCCACGTCTTAGACTTTCAGAACCCATGACAGAGCAGCCCTGCTTAGGGG 1850
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1851 GCTGGGCAAGTCAGCTACTCAGGGACCTCTCCTGCCTGGCAGGTGAGGGGATACCTCACTCTTCTTCCCAGCCC 1924
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1925 TGCTGAGTGAGCTCCTAGGTCTCTGGCCACCATGCCCTGGCACCTGAAGCACTGAGTCCTGGACGCTGGGCTGA 1998
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1999 CTCTGACGTGGGCCCTCCTGTGCTCTTAGGAGAATGTACCTGAACTTAGGTGTTTACAGTAGGGTCAGGCCTTC 2072
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2073 TCCTGAGCCCTTCCCAGCACTACTGCAGCCTACAGAGTGAAATGAGGGCTCTCACCATCCCGGACAGAAAGAGA 2146
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2147 TGCAGTTGCTAGAACTTGTGCTGGTCCCAGCCACCTCCTCAGTCAGATGGTAACTCTGGCCAACATCTTGGAGC 2220
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2221 TGGGCTCGTGCCTGAGGTACCAGTCTGCTTTGCTTTGAAACGAAGGAAGGACAAAGAAAGCCTGTCAGCTTGGG 2294
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2295 GTTCCGGACTAGCTGTTCCTCAGTCCTGCTATGGGAAACATGCTACCATTGTAATTTTTATAAAAATAAAATTT 2368
Query 877 ------------- 876
Sbjct 2369 AATTGTTGACAAA 2381
