Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11162
- Subject:
- NM_011488.3
- Aligned Length:
- 2382
- Identities:
- 1051
- Gaps:
- 1215
Alignment
Query 1 ATGGCTGTGTGGATACAAGCTCAGCAGCTCCAAGGAGAAGCCCTTCATCAGATGCAAGCGTTATATGGCCAGCA 74
|||||.|..|||||.||.||.||||||||.||.|||||.|||||.|..||||||||||.|||.|||||.|||||
Sbjct 1 ATGGCGGGCTGGATTCAGGCCCAGCAGCTTCAGGGAGATGCCCTGCGCCAGATGCAAGTGTTGTATGGGCAGCA 74
Query 75 TTTTCCCATTGAGGTGCGGCATTATTTATCCCAGTGGATTGAAAGCCAAGCATGGGACTCAGTAGATCTT-GAT 147
|||.|||||.|||||.|||||.||..|..||||||||||.||.|||||..|.|||||..|..|.|| ||| |||
Sbjct 75 TTTCCCCATCGAGGTCCGGCACTACCTGGCCCAGTGGATCGAGAGCCAGCCGTGGGATGCTATTGA-CTTGGAT 147
Query 148 AATCCACAGGA--GAACATTAAGGCCACCCAGCTCCTGGAGGGCCTGGTGCAGGAGCTGCAGAAGAAGGCAGAG 219
|||||.||||| || ..|.||||||||||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 148 AATCCCCAGGACCGA--GGTCAGGCCACCCAACTCCTGGAGGGCCTGGTGCAGGAGCTGCAGAAGAAGGCGGAG 219
Query 220 CACCAGGTGGGGGAAGATGGGTTTTTACTGAAGATCAAGCTGGGGCACTATGCCACACAGCTCCAGAACACGTA 293
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 CACCAGGTGGGGGAAGATGGGTTTTTGCTGAAGATCAAGCTGGGGCACTATGCCACACAGCTCCAGAACACGTA 293
Query 294 TGACCGCTGCCCCATGGAGCTGGTCCGCTGCATCCGCCATATATTGTACAATGAACAGAGGTTGGTCCGAGAAG 367
|||||||||.||||||||||||||.|||||.|||||.||.||..|||||||.|||||||||.||||.||.||||
Sbjct 294 TGACCGCTGTCCCATGGAGCTGGTTCGCTGTATCCGTCACATTCTGTACAACGAACAGAGGCTGGTTCGCGAAG 367
Query 368 CCAACAATGGTAGCTCTCCAGCTGGAAGCCTTGCTGATGCCATGTCCCAGAAACACCTCCAGATCAACCAGACG 441
||||||||.|.|||||.||.|||||...|||.|.|||.||||||||||||||.|||||.|||||||||||.|.|
Sbjct 368 CCAACAATTGCAGCTCCCCTGCTGGTGTCCTGGTTGACGCCATGTCCCAGAAGCACCTTCAGATCAACCAAAGG 441
Query 442 TTTGAGGAGCTGCGACTGGTCACGCAGGACACAGAGAATGAGTTAAAAAAGCTGCAGCAGACTCAGGAGTACTT 515
||||||||||||||.|||.||||.||||||||.|||||.|||.|.||.||||||||||||||.||.||||||||
Sbjct 442 TTTGAGGAGCTGCGCCTGATCACACAGGACACGGAGAACGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTACTT 515
Query 516 CATCATCCAGTACCAGGAGAGCCTGAGGATCCAAGCTCAGTTTGGCCCGCTGGCCCAGCTGAGCCCCCAGGAGC 589
|||||||||||||||||||||||||.||||||||||||||||||.||.|||||.||||||||.|||||||||||
Sbjct 516 CATCATCCAGTACCAGGAGAGCCTGCGGATCCAAGCTCAGTTTGCCCAGCTGGGCCAGCTGAACCCCCAGGAGC 589
Query 590 GTCTGAGCCGGGAGACGGCCCTCCAGCAGAAGCAGGTGTCTCTGGAGGCCTGGTTGCAGCGTGAGGCACAGACA 663
|..|||||.|||||||||||||||||||||||||.|||||.||||||.|||||.|||||||.||||||||||||
Sbjct 590 GCATGAGCAGGGAGACGGCCCTCCAGCAGAAGCAAGTGTCCCTGGAGACCTGGCTGCAGCGAGAGGCACAGACA 663
Query 664 CTGCAGCAGTACCGCGTGGAGCTGGCCGAGAAGCACCAGAAGACCCTGCAGCTGCTGCGGAAGCAGCAGACCAT 737
||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 CTGCAGCAGTACCGAGTGGAGCTGGCTGAGAAGCACCAGAAGACCCTGCAGCTGCTGCGGAAGCAGCAGACCAT 737
Query 738 CATCCTGGATGACGAGCTGATCCAGTGGAAGCGGCGGCAGCAGCTGGCCGGGAACGGCGGGCCCCCCGAGGGCA 811
|||||||||.||||||||||||||||||||||||.|.||||||||||||||||||||.||.|||||||||||||
Sbjct 738 CATCCTGGACGACGAGCTGATCCAGTGGAAGCGGAGACAGCAGCTGGCCGGGAACGGGGGTCCCCCCGAGGGCA 811
Query 812 GCCTGGACGTGCTACAGTCCTGGTGTGAGAAGTTGGCCGAGATCATCTGGCAGAACCGGCAGCAGATCCGCAGG 885
|||||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GCCTGGACGTGCTGCAGTCCTGGTGTGAGAAGCTGGCCGAGATCATCTGGCAGAACCGGCAGCAGATCCGCAGG 885
Query 886 GCTGAGCACCTCTGCCAGCAGCTGCCCATCCCCGGCCCAGTGGAGGAGATGCTGGCCGAGGTCAACGCCACCAT 959
|||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||
Sbjct 886 GCTGAGCACCTGTGCCAGCAGCTGCCCATCCCAGGCCCCGTGGAGGAGATGCTGGCTGAGGTCAACGCCACCAT 959
Query 960 CACGGACATTATCTCAGCCCTGGTGACCAGCACGTTCATCATTGAGAAGCAGCCTCCTCAGGTCCTGAAGACCC 1033
|||||||||.||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 960 CACGGACATCATCTCAGCTCTGGTCACCAGCACGTTCATCATCGAGAAGCAGCCTCCTCAGGTCCTGAAGACCC 1033
Query 1034 AGACCAAGTTTGCAGCCACTGTGCGCCTGCTGGTGGGCGGGAAGCTGAACGTGCACATGAACCCCCCCCAGGTG 1107
|||||||||||||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||||||.||||||
Sbjct 1034 AGACCAAGTTTGCGGCCACCGTGCGCCTGCTGGTGGGGGGAAAGCTGAATGTGCACATGAACCCCCCGCAGGTG 1107
Query 1108 AAGGCCACCATCATCAGTGAGCAGCAGGCCAAGTCTCTGCTCAAGAACGAGAACACCCGCAAG----------- 1170
|||||.|||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||.
Sbjct 1108 AAGGCGACCATCATCAGCGAGCAGCAGGCCAAGTCCCTGCTCAAGAATGAGAACACCCGCAATGAGTGCAGCGG 1181
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1182 CGAGATCCTGAACAACTGTTGCGTCATGGAGTACCACCAGGCCACTGGCACGCTCAGCGCCCACTTCAGAAACA 1255
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1256 TGTCACTGAAAAGAATCAAGCGCGCCGACAGGCGTGGTGCAGAGTCGGTGACGGAGGAGAAGTTCACAGTCCTG 1329
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1330 TTTGAGTCTCAGTTCAGCGTTGGCAGCAACGAGCTGGTGTTCCAGGTGAAGACCCTGTCCCTCCCTGTGGTCGT 1403
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1404 TATCGTCCATGGCAGCCAGGACCACAATGCTACTGCCACCGTGCTGTGGGACAATGCCTTTGCTGAGCCGGGCA 1477
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1478 GGGTGCCATTTGCTGTGCCTGACAAGGTGCTGTGGCCGCAGCTGTGTGAAGCGCTCAACATGAAATTCAAGGCT 1551
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1552 GAAGTACAGAGCAACCGGGGCTTGACCAAAGAGAACCTCGTGTTCCTGGCACAGAAACTGTTCAACATCAGCAG 1625
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1626 CAACCACCTCGAGGACTACAACAGCATGTCTGTGTCCTGGTCCCAGTTCAACCGGGAGAACTTGCCCGGCTGGA 1699
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1700 ACTACACCTTCTGGCAGTGGTTCGACGGGGTGATGGAGGTGCTGAAGAAGCACCATAAGCCCCATTGGAATGAT 1773
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1774 GGGGCTATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTGCTCATCAACAAGCCGGACGGGACCTTCCT 1847
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1848 GCTGCGCTTCAGTGACTCGGAAATCGGGGGCATCACCATTGCTTGGAAGTTTGACTCTCCGGACCGAAACCTCT 1921
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1922 GGAATCTGAAGCCATTCACGACGCGAGATTTCTCCATTCGGTCCCTGGCCGACCGGCTGGGGGACCTGAACTAC 1995
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 1996 CTTATCTACGTGTTCCCAGACCGACCCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTGTACTTGCGAAAGC 2069
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2070 AGTTGACGGATACGTGAAGCCACAGATCAAGCAAGTGGTCCCTGAGTTCGTCAATGCATCCACAGATGCCGGAG 2143
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2144 CCAGCGCCACCTACATGGACCAGGCTCCTTCCCCAGTCGTGTGCCCTCAACCTCACTACAACATGTACCCACCC 2217
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2218 AACCCTGACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGA 2291
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2292 AGAACTTTTACGCCGGCCCATGGACAGTCTCGACGCCCGCCTCTCCCCACCTGCTGGTCTCTTCACCTCCGCTA 2365
Query 1171 -------------- 1170
Sbjct 2366 GAAGCTCCCTGTCC 2379
