Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11177
Subject:
XR_426995.3
Aligned Length:
2614
Identities:
629
Gaps:
1978

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGCGCACTCGGCGGCCAGGCGCGGCGGGAGCGCGCCCTAGGGGGCGGGCACTGAAGCTGCGGCTTGCGGTTCAG  74

Query    1  -----------------------------------ATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCG  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGTTCTAGGGCGCCGGGCGCTCGGGCCTCGGCCATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCG  148

Query   40  GCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCC  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCC  222

Query  114  GGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGATTCGGG  187
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  223  GGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGGTTCGGG  296

Query  188  GCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGC  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGC  370

Query  262  TCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGA  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGA  444

Query  336  TCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAA------------------  391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  445  TCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAACAGTGTCCTCGTCTTTGT  518

Query  392  ------CAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAA  459
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCCTTCAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAA  592

Query  460  GATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCC  533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCC  666

Query  534  TGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGG  607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGG  740

Query  608  CTGAGGAATCAAGTATGGATTTACCAATATATGAAGAT------------------------------------  645
            ||||||||||||         ||...|.|.|||||||.                                    
Sbjct  741  CTGAGGAATCAA---------TAAGCAGAAATGAAGAAACAAGTGAAGAAAGTCAGGAAGATGAAAAGCAAGAT  805

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct  806  ACTTGGGAACAACAGCAAATGAGGAAAGCAGTTAAAATCATAGAGGAAAGAGACATAGATCTTTCCTGTGGCAA  879

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct  880  TGGATCTTCAAAAGTGAAGAAATTTGATACTTCCATTTCATTTCCGCCAGTAAATTTAGAAATTATAAAGAAGC  953

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct  954  AATTAAATACTAGATTAACATTACTACAGGAAACTCACCGCTCACACCTGAGGGAGTATGAAAAATACGTACAA  1027

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1028  GATGTCAAAAGCTCAAAGAGTACCATCCAGAACCTAGAGAGTTCATCAAATCAAGCTCTAAATTGTAAATTCTA  1101

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1102  TAAAAGCATGAAAATTTATGTGGAAAATTTAATTGACTGCCTTAATGAAAAGATTATCAACATCCAAGAAATAG  1175

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1176  AATCATCCATGCATGCACTCCTTTTAAAACAAGCTATGACCTTTATGAAACGCAGGCAAGATGAATTAAAACAT  1249

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1250  GAATCAACGTATTTACAACAGTTATCACGCAAAGATGAGACATCCACAAGTGGAAACTTCTCAGTAGATGAAAA  1323

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1324  AACTCAGTGGATTTTAGAAGAGATTGAATCTCGAAGGACAAAAAGAAGACAAGCAAGGGTGCTTTCTGGGAATT  1397

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1398  GTAACCATCAGGAAGGAACATCTAGTGATGATGAACTGCCTTCAGCAGAGATGATTGACTTCCAAAAAAGCCAA  1471

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1472  GGTGACATTTTACAGAAACAGAAGAAAGTTTTTGAAGAAGTGCAAGATGATTTTTGTAACATCCAGAATATTTT  1545

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1546  GTTGAAATTTCAGCAATGGCGAGAAAAGTTTCCTGACTCCTATTATGAAGCTTTCATTAGTTTATGCATACCAA  1619

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1620  AGCTTTTAAATCCCCTAATACGAGTTCAGTTGATTGATTGGAATCCTCTTAAGTTGGAATCCACAGGTTTAAAA  1693

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1694  GAGATGCCATGGTTCAAATCTGTAGAAGAATTTATGGATAGCAGTGTGGAAGATTCAAAGAAGGAAAGTAGTTC  1767

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1768  AGATAAAAAAGTCTTGTCTGCAATCATCAACAAAACAATTATTCCCCGACTTACAGGATTTACTTAAATCCATT  1841

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1842  GTTTCAAGAATGAAAAAGGCAGTAGAAGATGATGTTTTTATTCCTCTGTATCCAAAGAGTGCTGTAGAAAACAA  1915

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1916  AACATCACCTCATTCAAAGTTCCAAGAAAGACAGTTCTGGTCAGGCCTAAAGCTCTTCCGCAATATTCTTCTTT  1989

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 1990  GGAATGGACTCCTTACAGATGACACCTTGCAAGAACTAGGACTAGGGAAGCTGCTAAATCGTTACCTTATTATA  2063

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2064  GCACTTCTCAATGCCACACCTGGGCCAGATGTGGTTAAAAAGTGCAACCAGGTAGCAGCATGTCTACCAGAAAA  2137

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2138  ATGGTTTGAAAATTCTGCCATGAGGACATCTATTCCACAGCTAGAAAACTTCATTCAGTTTTTATTGCAGTCTG  2211

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2212  CACATAAATTATCTAGAAGTGAATTCAGGGATGAAGTCGAAGAAATAATTCTTATTTTGGTGAAAATAAAAGCT  2285

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2286  TTGAATCAAGCAGAATCCTTCATAGGAGAGCATCACCTAGACCATCTTAAATCACTAATTAAAGAAGATTGAAT  2359

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2360  AAACTTTATTGGAAAATGCTAAAATTTTAATATAGTTACACTCAGTTCCTTTGTTTGAGAAGAAGCTGGTGCCT  2433

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2434  CTCTCTTCTTTATTCCCTGTAATAGAAGGTAGGATTTGAAAAAAAGCAGGACTCCACCTCTGTATTCCCCCGTG  2507

Query  646  --------------------------------------------------------------------------  645
                                                                                      
Sbjct 2508  CTTTACCTTCTGGCATCATGAAAAGCTGCCATGATTCTGTGGTGTTCTAAGGAATTAAATGCACTGGAGCTTTA  2581

Query  646  ------------------------  645
                                    
Sbjct 2582  AGAGCTCAACGTGTTTCCCTTTGA  2605

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