Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11185
• Subject: XM_011241724.1
• Aligned Length: 1253
• Identities: 797
• Gaps: 376

Alignment

Query    1  ATGGAAAGGATGAGTGACTCTGCAGATAAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGCCCCGACATCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAAAGCTTTCAGGAGGCCCTGGCTATCTATCCACCATGTGGGAGGAGGAAAATCATCTTATCAGACGAAGGCA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAATGTATGGT---AGG--AATGAATTGATAGCCAGATACAT---CAAACTCAGGACAGGCAAGACGAGGACCA  214
                  |||||   |||  ..|...|||.|..||   |.|.|   |..||.|.|                    
Sbjct    1  ------ATGGTTACAGGCTTTTCCTTTGTTTTCC---TCCCTTCCCCTACCCTG--------------------  45

Query  215  GAAAACAGGTGTCTAGTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTGATTTTCATTCCAAGCTAAAGGTA  288
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||    
Sbjct   46  -----CAGGTGTCTAGTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTGATTTTCATTCCAAGCTGAA----  110

Query  289  ACAAGCATGGATCAGACTGCAAAGGATAAGGCCCTGCAGCACATGGCGGCCATGTCCTCAGCCCAGATCGTCTC  362
                    ||||||||||||.|||||.||||||||||||||||||||.||||||||.|||||||||||||||||
Sbjct  111  --------GGATCAGACTGCCAAGGACAAGGCCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGATCGTCTC  176

Query  363  GGCCACTGCCATTCATAACAAGCTGGGGCTGCCTGGGATTCCACGCCCGACCTTCCCAGGGGCGCCGGGGTTCT  436
            |||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.||||..||||||||||
Sbjct  177  GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCGGGGGGTCCGGGGTTCT  250

Query  437  GGCCGGGAATGATTCAAACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCTTTTGTGCAGCAGGCCTACCCC  510
            ||||.||.|||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  251  GGCCTGGGATGATACAGACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCCTTTGTGCAGCAGGCCTACCCC  324

Query  511  ATCCAGCCAGCGGTCACAGCCCCCATTCCAGGGTTTGAGCCTGCATCGGCCCCAGCTCCCTCAGTCCCTGCCTG  584
            |||||||||||.||||||||||||||||||||||||||||||.|.||.||||||||.||||||||.||||||||
Sbjct  325  ATCCAGCCAGCAGTCACAGCCCCCATTCCAGGGTTTGAGCCTACGTCAGCCCCAGCCCCCTCAGTTCCTGCCTG  398

Query  585  GCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTCGAGCAGCAGCGAGACC  658
            |||.||.||.|||||||||||||||||||||||||||||||||||.||.|||||.||.||.||||||.||||||
Sbjct  399  GCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAGACC  472

Query  659  CAGACTC-------------------------------------------------------------------  665
            |||||||                                                                   
Sbjct  473  CAGACTCGTACAACAAACACCTCTTCGTGCACATCGGGCATGCCAACCATTCTTACAGTGACCCGTTGCTCGAA  546

Query  666  --------------------------------------------------------------------------  665
                                                                                      
Sbjct  547  TCTGTGGACATTCGTCAGATATATGACAAATTTCCTGAAAAGAAAGGTGGCTTGAAGGAGCTGTTTGGAAAGGG  620

Query  666  ---------------------------------GGCTGATTTAAACTGCAATATTCAAGATGATGCTGGGGCTT  706
                                             |||.||.||||||||||||||.|||||.||.||.|||||.|
Sbjct  621  CCCTCAAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTTAAACTGCAATATCCAAGACGACGCCGGGGCCT  694

Query  707  TTTATGGTGTAACCAGTCAGTACGAGAGTTCTGAAAATATGACAGTCACCTGTTCCACCAAAGTTTGCTCCTTT  780
            ||||||||||.|.|||||||||.|||||||||||.||.||||||||.|||||||||||||||||.|||||||||
Sbjct  695  TTTATGGTGTGAGCAGTCAGTATGAGAGTTCTGAGAACATGACAGTTACCTGTTCCACCAAAGTGTGCTCCTTT  768

Query  781  GGGAAGCAAGTAGTAGAAAAAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCCGATTTGTATACCGAATAAA  854
            |||||.||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|||||||||||
Sbjct  769  GGGAAACAAGTAGTAGAAAAAGTAGAGACGGAGTATGCGAGGTTCGAGAATGGTCGATTCGTGTACCGAATAAA  842

Query  855  CCGCTCCCCAATGTGTGAATATATGATCAACTTCATCCACAAGCTCAAACACTTACCAGAGAAATATATGATGA  928
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  843  CCGCTCGCCAATGTGTGAATATATGATCAACTTCATCCACAAGCTCAAACACCTACCAGAGAAATATATGATGA  916

Query  929  ACAGTGTTTTGGAAAACTTCACAATTTTATTGGTGGTAACAAACAGGGATACACAAGAAACTCTACTCTGCATG  1002
            ||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  917  ACAGTGTTTTGGAAAACTTCACCATATTATTGGTGGTAACAAACAGGGATACACAAGAAACTCTGCTCTGCATG  990

Query 1003  GCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGAGCACAACATCATATTTACAGGCTTGTAAAGGAC  1071
            ||||||||.||||||||.||.|||||.||||||||||||||.||.|||||.|||||||||||.||||||
Sbjct  991  GCCTGTGTATTTGAAGTCTCGAATAGCGAACACGGAGCACAGCACCATATCTACAGGCTTGTGAAGGAC  1059