Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11236
- Subject:
- NM_001348433.2
- Aligned Length:
- 2394
- Identities:
- 365
- Gaps:
- 2013
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCTACTGTGTCTGGAGAGCTACAGGATTCAGTACTTCAAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGTATGCCTCACCAGGAGATCCTTGCTGCAGATGAAGTGTTACAAGAAAGTGAAATGAGACAACAGGATATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATATCACATGATGAACTCATGGTCCATGAGGAGACAGTGAAAAATGATGAAGAGCAGATGGAAACACATGAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTTCCTCAAGGACTACAGTATGCACTTAATGTCCCTATAAGCGTAAAGCAGGAAATTACTTTTACTGATGTAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAGCAACTGATGAGAGACAAAAAACAAATCAGAGAGCCAGTAGACTTACAGAAAAAGAAGAAGCGGAAACAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTTCTCCCGCAAAAATCCTTACAATAAATGAGGATGGATCACTTGGTTTGAAAACCCCTAAATCTCACGTTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGCACTGCAATGCTGCCTTTAGAACGAACTATCACTTACAGAGACATGTCTTCATTCATACAGGTGAAAAAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATTTCAATGTAGTCAATGTGACATGCGTTTCATACAGAAGTACCTGCTTCAGAGACATGAGAAGATTCATACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTGAAAAACCATTTCGCTGTGATGAATGTGGTATGAGATTCATACAAAAATATCATATGGAAAGGCATAAGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTCATAGTGGAGAAAAACCTTACCAGTGTGAATACTGTTTACAGTATTTTTCCAGAACAGATCGTGTATTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACATAAACGTATGTGCCATGAAAATCATGACAAAAAACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTGAGGAAGATTCTGGCTTTTCTACATCACCAAAAGACAACTCACTGCCAAAAAAGAAAAGGCAGAAAACGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAAAAATCATCTGGAATGGACAAAGAGAGTGCTTTGGACAAATCTGACCTGAAAAAAGACAAAAATGATTACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCCTCTTTATTCTTCAAGTACTAAAGTAAAAGATGAGTATATGGTTGCAGAATATGCTGTTGAAATGCCACAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCGTCAGTTGGGGGCTCGCATTTAGAAGATGCGTCAGGAGAAATACACCCACCTAAGTTAGTTCTCAAAAAAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAATAGTAAGAGAAGTCTGAAACAGCCACTGGAGCAAAATCAAACAATTTCACCTTTATCCACATATGAAGAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAAGTTTCAAAGTATGCTTTTGAACTTGTGGATAAACAGGCTTTACTGGACTCAGAAGGCAATGCTGACATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATCAGGTTGATAATTTGCAGGAGGGGCCCAGTAAACCTGTGCATAGTAGTACTAATTATGATGATGCCATGCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAATGTGGGTACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGCTTCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCACGGCATCCATATTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGTCACAGGCACTGAATGTGGAGATTAAGAGTAATCATGACAAAAATGTTATTCCAGATGAGGTACTGCAGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTGTTGGATCATTATTCCCACAAAGCTAATGGACAGCATGAGATATCCTTCAGTGTTGCAGATACTGAAGTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTTCTAGCATATCAATAAATTCTTCAGAAGTACCAGAGGTCACCCCGTCAGAGAATGTTGGATCAAGCTCCCAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCATCCTCATCAGATAAAGCCAACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAACTAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAAAATGATGCCTATTTGAATAGCCCGAGCCTTAACTTTGTGACTGATAACCAGACCCTCCCAAATCAGCCAG 1924
Query 1 -----------------------------------ATGC----------GTTTC-ATACAG------------- 15
|||| .|||| || |||
Sbjct 1925 CATTCTCTTCCATAGACAAGCAGGTCTATGCCACCATGCCCATCAATAGCTTTCGAT-CAGGAATGAATTCTCC 1997
Query 16 ---AAGTACCTGCTTCAGAGA-----CA---TGAGAAGATTCATA-CTGGTGAAAAAC------CATTTCGCTG 71
||| |.|..||.||||.| || || ||.|.||| .||||||...|| ||||||.||.
Sbjct 1998 ACTAAG-AACAACTCCAGATAAGTCCCACTTTG----GACTAATAGTTGGTGATTCACAGCACTCATTTCCCTT 2066
Query 72 TGATGAATGTGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTC 145
| |..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 T------TCAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTC 2134
Query 146 AGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCC 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2135 AGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCC 2208
Query 220 TATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGG 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 TATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGG 2282
Query 294 GACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTG 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2283 GACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTG 2356
Query 368 ATGCCACAACTGGCCAGACTTTTGGC 393
||||||||||||||||||||||||||
Sbjct 2357 ATGCCACAACTGGCCAGACTTTTGGC 2382
