Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11236
- Subject:
- XM_006522103.3
- Aligned Length:
- 2265
- Identities:
- 352
- Gaps:
- 1881
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCCGCCGTGTCTGGAGAACTGCAGGAGTCAGTACTTCAAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGTTTGCCTCACCAGGAGATCCTTGCTGCAGACGAAGTGTTACAAGAGAGTGAAATGAGACAACAGGATATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATATCCCATGATGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATCCTTACAATAAATGAGGATGGATCACTTGGTTTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACCCCTAAATCTCACGTTTGTGAGCACTGCAATGCTGCCTTTAGAACGAACTATCACTTACAGAGGCATGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCATTCATACAGGCGAAAAACCGTTTCAATGTAGTCAATGTGACATGCGTTTCATACAGAAGTACCTGCTTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGACACGAGAAGATCCATACCGGTGAAAAACCATTTCGCTGTGATGAATGTGGTATGAGATTCATACAGAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCACATGGAAAGGCACAAAAGAACTCACAGTGGAGAGAAGCCTTATCAGTGTGAATACTGCTTACAGTATTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCAGAACAGATCGTGTATTGAAACATAAACGTATGTGCCATGAAAATCACGACAAAAAACTAAACAGATGTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATCAAAGGTGGCCTTCTGACATCAGAGGAAGATTCTGGCTTTTCTACATCACCAAAAGATAATTCACTGCCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAAGAAAAGGCAAAAAACTGAGAAGAAATCGTCTGGGATGGACAAGGAGAGTGTGCTGGACAAATCTGACCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAAGACAAGAACGATTACCTGCCTCTCTACTCGTCGAGCACTAAAGTAAAGGATGAGTACATGGTGGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTATGCTGTTGAGATGCCACACTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATCTGGAGAAATACACCCAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAAGTTGGTTCTCAAAAAAATCAATAGTAAGAGAAGTCTGAAGCAGCCCTTGGAGCAAAGTCAAACCATTTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCCTATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTACTGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCAGAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGGGCCCCAGCAAACCTGTGCACAGCAGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAATTACGACGATGCCATGCAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACGCACTGAATGTGGGCACCATAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGCACCACAGCATCCATACTGGATTCCCAGGCACTGAATGTGGAGATTAAGAGCAATCATGACAAAAATGTTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCAGATGAGGTCCTGCAGACTCTGCTGGATCATTATTCCCACAAACCTAATGGACAGCATGAGATTTCCTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCGTTGCAGATACTGAAGTGACTTCTAGCATATCAATCAATTCTTCCGATGTACCTGAAGTCACCCAGTCAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGATAAAGCTAACATGTTGCAGGAATACTCCAAGTTTCTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAGGCTTTGGACAGAACTAGCCAAAACGATGCCTATTTGAATAGCCCGAGCCTTAACTTTGTGACTGACAAC 1776
Query 1 -------------ATGCG-----------TTTCATACAGAAGTA------------CCTGC------------- 25
||.|| ||.||||.|.|||.| |.|||
Sbjct 1777 CAGACCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATGCCCATCAATAGCTT 1850
Query 26 ---TTCAGAGACATG------------AGAA------------------------GATTCATACT-GGTG---- 55
.|||| || ||| |||| ||.|.|||.| ||||
Sbjct 1851 TCGATCAG-GA-ATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTCGGTGACTC 1922
Query 56 --AAAAACCATTTCGCTGTGATGAATGTGGTGATGAGACAAACCATGCTTCTGCCACATCAACA-CAGGACTTT 126
|..|.||.||||.||.| |..|||||.|||||||||||.||.||||||||.|||||| || ||||||
Sbjct 1923 ACAGCACCCGTTTCCCTTT------TCAGGTGACGAGACAAACCACGCCTCTGCCACGTCAACAGCA-GACTTT 1989
Query 127 CTGGATCAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGA 200
.||||||||||.|||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 1990 TTGGATCAAGTCACTTCTCAGAAGAAAGCTGAGGCACAGCCTGTCCACCAGGCTTACCAAATGAGCTCCTTTGA 2063
Query 201 ACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGG 274
.|||||||||||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2064 GCAGCCCTTCCGTGCTCCATATCATGGATCCAGAGCTGGAATAGCAACTCAGTTTAGCACTGCCAATGGACAGG 2137
Query 275 TGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCT 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 TGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCT 2211
Query 349 GGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGC 393
|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 2212 GGGATGACATCTTCACCAGATGCCACAACTGGCCAGACTTTTGGC 2256
