Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11249
- Subject:
- XM_011241075.2
- Aligned Length:
- 1867
- Identities:
- 1045
- Gaps:
- 722
Alignment
Query 1 ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGAC 74
|||||.||.||||.|.|||||||.|||||||||||||||||||||||.||.|||||.|||||.|||||||||||
Sbjct 1 ATGGCCGAGGCGGGCGCGGGCTTCCTGGAGCAGCTCAAGTCCTGCATCGTGTGGTCGTGGACCTATCTGTGGAC 74
Query 75 CGTGTGGTTCTTCATCGTGCTATTCCTGGTCTACATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA 148
|||||||||||||.|||||||.||||||||||||||||||.|||||||..|||..||||||||||||.||||||
Sbjct 75 CGTGTGGTTCTTCCTCGTGCTCTTCCTGGTCTACATCCTGAGGGTGCCCCTGAGGATCAACGACAACCTGAGCA 148
Query 149 CAGTGAGCATGTTTTTGAACACATTAACACCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCA 222
||||||||||||||||||||||.|||||.||.|||||||||||||||||.||||||||||||||.||||||||.
Sbjct 149 CAGTGAGCATGTTTTTGAACACGTTAACCCCAAAGTTCTACGTGGCCCTGACAGGCACTTCCTCGCTAATATCG 222
Query 223 GGGCTTATTTTGATATTTGAATGGTGGTATTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAG 296
||.|||||||||||||||||||||||||||||||||||.||.|||||.||.|||||||||||||||||.|||||
Sbjct 223 GGACTTATTTTGATATTTGAATGGTGGTATTTTCGCAAGTATGGAACATCTTTCATTGAACAAGTCTCCGTAAG 296
Query 297 CCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAACA---------------------ACTCAG 349
|||||||||||||||||||||||||||||||||||||||||||||.| ||||||
Sbjct 297 CCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAATAATTCTAATTCCAGTAATGGAGACTCAG 370
Query 350 ATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATAC 423
|||||||.||.||||||||||||||||||||||||||||||||||||||.|||.|.|||||||||||.|||||.
Sbjct 371 ATTCCAACAGACAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTGAATCTGTTTAGGGGTGCGGAATAT 444
Query 424 AATCGGTATACTTGGGTGACAGGACGAGAGCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCA 497
||||||||.||||||||.|||||||||||||||||.||.||||||||||||||.|||||||||||.||||||||
Sbjct 445 AATCGGTACACTTGGGTCACAGGACGAGAGCCTCTGACCTACTATGACATGAACCTCTCTGCCCAGGACCACCA 518
Query 498 GACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAA 571
||||||||||||||||||.||.||.|||||.||.||.|||||||||||||||||.|||||.||||||||.||.|
Sbjct 519 GACATTCTTTACTTGTGATTCAGATCATCTTCGCCCTGCAGATGCAATAATGCAAAAAGCTTGGAGAGAAAGGA 592
Query 572 ACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATG-------------------------- 619
||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 593 ACCCTCAAGCCAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAACGAAATTAGGTCCAGAGTTGAAGTTCCC 666
Query 620 -------------------------------------------AGTGTGCAACTGCTTATATTCTCTTGGCTGA 650
|||||||||||||.||.|||||||||||.||
Sbjct 667 CTAATTGCTTCCTCTACCATCTGGGAGATAAAATTGTTACCAAAGTGTGCAACTGCGTACATTCTCTTGGCGGA 740
Query 651 AGAGGAAGCAACAACCATTGCTGAAGCAGAAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACC 724
|||.|||||.|||||.||||||||||||||||||.|.|||||||||||||||||||||||||||||.|||||||
Sbjct 741 AGAAGAAGCGACAACTATTGCTGAAGCAGAAAAACTCTTTAAGCAGGCCCTGAAGGCTGGAGATGGTTGTTACC 814
Query 725 GACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTG 798
|.||||||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||||||||.||.
Sbjct 815 GGCGCTCTCAGCAGCTACAACATCATGGGTCCCAGTATGAAGCTCAACACAGACGAGACACCAATGTCTTAGTC 888
Query 799 TACATCAAAAGAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGA 872
||.||||||||||||||.||.|||||||||.|.|||||.||.||||||||.|||||||||||.|||||||||||
Sbjct 889 TATATCAAAAGAAGGCTGGCGATGTGTGCCCGGAGACTTGGAAGGACCAGAGAAGCAGTGAAGATGATGAGAGA 962
Query 873 TTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTAC 946
|||||||||||||||.|||||.||.||.|||||||||||||||||.||||||.|||||||.|||||||||||.|
Sbjct 963 TTTAATGAAGGAGTTTCCCCTCCTAAGCATGTTCAATATCCATGAGAACCTTCTAGAAGCTCTTCTGGAACTCC 1036
Query 947 AAGCATATGCTGATGTTCAGGCAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGC 1020
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct 1037 AAGCTTATGCTGATGTTCAGGCAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCGGCGACAATATGC 1110
Query 1021 TACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAA--------------------------------- 1061
||||||||.||..||||||||||||||||||||||||||||
Sbjct 1111 TACACAGCCGCCCTGCTCAAAGCAAGAGCTGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCC 1184
Query 1062 -------------------------------------------------------------------------- 1061
Sbjct 1185 TACACAGCGACTCCAGCTTGGGAGGGCAGGGCCAGGGTTGCCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGC 1258
Query 1062 -----------------------------ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGA 1106
|||||||||.||||||||.||||||.|||||||||||||||||||
Sbjct 1259 ACAGCTCTGGAGTTAGCCCTGGGTGTGAGATTCTCTCCAGAGGCTGCGTCTCGGAGGGGGCTGAGCACAGCAGA 1332
Query 1107 GATGAATGCAGTAGAGGCCATTCATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGA 1180
|||||||||||||||.|||||.||.||||||||||||||
Sbjct 1333 GATGAATGCAGTAGAAGCCATCCACAGAGCTGTGGAATT----------------------------------- 1371
Query 1181 AAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT 1254
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1255 CTTGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGAT 1328
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1329 CCCTTATCCCTTGGAAAAGGGGCACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGC 1402
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1403 TTCCATCTTTCCATGAAGTCTCAGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTA 1476
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1477 TGTTCCTTCACAGCCATGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTT 1550
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1551 CCTCAGCACTTTGTTTGCCCCCTTAAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGC 1624
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1625 ACCAGCTAACACGGATC 1641
Sbjct 1372 ----------------- 1371
