Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11270
- Subject:
- XM_017025197.1
- Aligned Length:
- 1266
- Identities:
- 389
- Gaps:
- 855
Alignment
Query 1 ATGTCGTCCAACTGCACCAGCACCACGGCGGTGGCGGTGGCGCCGCTCAGCGCCAGCAAGACCAAGACCAAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAGCATTTCGTGTGCCAGAAAGTGAAGCTATTCCGGGCCAGCGAGCCGATCCTCAGCGTCCTGATGTGGGGGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGAACCACACGATCAATGAGCTGAGCAATGTTCCTGTTCCTGTCATGCTAATGCCAGATGACTTCAAAGCCTAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGCAAGATCAAGGTGGACAATCATCTCTTCAATAAGGAGAACCTGCCCAGCCGCTTTAAGTTTAAGGAGTATTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCCATGGTGTTCCGAAACCTTCGGGAGAGGTTTGGAATTGATGATCAGGATTACCAGAATTCAGTGACGC-GC 369
||.||..||.|| |.
Sbjct 1 -----------------------------------------------------------ATGCAAGGAGGCTGG 15
Query 370 AGCGCCCCCATCAACAGTGACAGCCAGGGTCGGTGTGGCACGCGTTT----CCT----CACCACCTACGACCGG 435
| |||.|.|||.| |.|.||| ||| .||| ||||..||
Sbjct 16 A--------------------------GGTGGCTGTTG--CCCATTTTAAGCCTGAGAAACC-CCTATTAC--- 57
Query 436 CGCTTTGTCATCAAG-ACTGTGTCCAGCGAGGACGTGGCGGAGATGCACAAC--ATCTTAAAGAAATACCACCA 506
.|||| || || ||||| .||||| ||.|| .||| || |
Sbjct 58 ------TTCAT--AGAAC-----CCAGC----------TGGAGA---ACTACTGGTCT---AG----------A 92
Query 507 GTTTATAGTGGAGTGTCATGGCAACACGCTTTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGTG 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 GTTTATAGTGGAGTGTCATGGCAACACGCTTTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGTG 166
Query 581 TGGAAACCTACATGGTGGTTACCAGGAACGTGTTCAGCCATCGGCTCACTGTGCATCGCAAGTATGACCTCAAG 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 TGGAAACCTACATGGTGGTTACCAGGAACGTGTTCAGCCATCGGCTCACTGTGCATCGCAAGTATGACCTCAAG 240
Query 655 GGTTCTACGGTTGCCAGAGAAGCGAGCGACAAGGAGAAGGCCAAGGACTTGCCAACATTCAAAGACAATGACTT 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GGTTCTACGGTTGCCAGAGAAGCGAGCGACAAGGAGAAGGCCAAGGACTTGCCAACATTCAAAGACAATGACTT 314
Query 729 CCTCAATGAAGGGCAGAAGCTGCATGTGGGAGAGGAGAGTAAAAAGAACTTCCTGGAGAAACTGAAGCGGGACG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 CCTCAATGAAGGGCAGAAGCTGCATGTGGGAGAGGAGAGTAAAAAGAACTTCCTGGAGAAACTGAAGCGGGACG 388
Query 803 TTGAGGAGATTCT----------------------------CGTTCTG-------TCC----------CCAG-- 829
||||| |||| |.|.||| ||| ||.|
Sbjct 389 TTGAG----TTCTTGGCACAGCTGAAGATCATGGACTACAGCCTGCTGGTGGGCATCCACGACGTGGACCGGGC 458
Query 830 ---GCAGGAGAATCGCT--------------------------------------------------------- 843
|||||||.| |.|
Sbjct 459 AGAGCAGGAGGA--GATGGAGGTGGAGGAGCGGGCAGAGGACGAGGAGTGTGAGAATGATGGGGTGGGTGGCAA 530
Query 844 -------------------------------------------------------------------------- 843
Sbjct 531 CCTACTCTGCTCCTATGGCACACCTCCGGACAGCCCTGGCAACCTCCTCAGCTTTCCTCGGTTCTTTGGTCCTG 604
Query 844 -------------------------------------------------------------------------- 843
Sbjct 605 GGGAATTCGACCCCTCTGTTGACGTCTATGCCATGAAAAGCCATGAAAGTTCCCCCAAGAAGGAGGTGTATTTC 678
Query 844 -------------------------------------------------------------------------- 843
Sbjct 679 ATGGCCATCATTGATATCCTCACGCCATACGATACAAAGAAGAAAGCTGCACATGCTGCCAAAACGGTGAAACA 752
Query 844 -------------------------------------------------------------------------- 843
Sbjct 753 CGGGGCAGGGGCCGAGATCTCGACTGTGAACCCTGAGCAGTACTCCAAACGCTTCAACGAGTTTATGTCCAACA 826
Query 844 -------- 843
Sbjct 827 TCCTGACG 834
