Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11285
- Subject:
- XM_011534195.2
- Aligned Length:
- 4059
- Identities:
- 666
- Gaps:
- 3393
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAAGAATCGGATGAGATCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCCCGTCCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCGGCAGCGCCGGGCTGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCGGCGCCGGCGCCGGAGCCGGGGTGGGTGCAGGCGGCGGCGGGGGCAGCGGCGCGAGCAGCGGCGGCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGGGGGCTGCAACCCAGCAGCCGCGCTGGCGGCGGCCGGCCCTCCAGCCCCAGCCCGTCGGTGGTGAGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAGAAGGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGAGAGGAAGAAGAGGCTGCAGCTGTATGTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGTGATGCGCTGCATCGCCTACCCCTTTAATGCCAAGCAGCCCACCGACATGGCTCGCCGGCAGCAGAAGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCAAACAGCAGCTGCAGACAGTCAAGGACCGGTTTCAGGCTTTCCTCAATGGGGAAACCCAGATCATGGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAAGCCTTCATGAACGCTGTGCAGAGTTACTATGAGGTGTTCCTGAAGAGCGACCGTGTGGCCCGCATGGTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAAGAGAGTGCGCAGCCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCTACCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATTCTGAGCAAGGAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTCTATGAGATGTTCCAGAACATTCTTGGGATCAAGAAGTTCGAACATCAGCTCCTTTACAATGCCTGCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGACAATCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTACAAATGGCAGACCAAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAACGCAGCCACAATGCTTCCATCATCGACATGGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGATGTCGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTGTCTTTCTCATTGGAGGTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTTGGCTCCAAATCGCATCGTAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTGCACAATGGAGGTGGAAGGAGGAGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAAACCAACCTGGGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCCAGGGTGACTTCTCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAGCTGTTCACAGAGAGCACAGGCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGTTATTCTCCATCCCACCCCGAACAGCCCCAAACAGTCAGAGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCACAAAATGACAGTCTCCAAAAACTGCCCCGACCAAGATCTCAAAATCAAACTTGCTGTCCGAATGGATAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTCAAAACATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AACTTCTACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCAATGCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGAAATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CATGGCATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTTACTTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAGACGAGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CGGGCAGAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGGAACAGTCAACAAATGCATGTGTACCTTAGTGGGCTGCCACCAAATACAGACCCTGAAGGGAGCAAAACTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCTCCCCACCTGAACCAGAAGCTAAAAAAGATACCAAAAAGGAATCCAAAAAAAGAAAAGATTCCAAAACCCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCAAATCAAGAGCTGAAAAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAAGAGAGGCTCCGAGTTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGGTGCTTTGAAAGCTACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGAGGTAAAAACAGTTATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCAAAATCGAAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGGTGGTCAGATTTAATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCTCCAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAATGGAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCAATT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCACCTCAGAAGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGGAAAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTGCATTT 3330
Query 1 ---------------------------------------------------------------ATGTTTAATGT 11
|||||||||||
Sbjct 3331 GAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGT 3404
Query 12 TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAATGTGGC 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAATGTGGC 3478
Query 86 ATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 ATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAG 3552
Query 160 TTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCT 3626
Query 234 GTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACG 3700
Query 308 TGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACATAGAAAGGTTATTT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACATAGAAAGGTTATTT 3774
Query 382 GATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATAT 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATAT 3848
Query 456 TTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACT 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACT 3922
Query 530 CCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGT 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGT 3996
Query 604 GAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 4059
