Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11285
- Subject:
- XM_017007370.2
- Aligned Length:
- 4086
- Identities:
- 651
- Gaps:
- 3435
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAAGAATCGGATGAGATCGTGGAGGAGGAGAGCGGCAAGGAGGTGCTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCCCGTCCGGCGCGCGCCTGTCTCCCAGCCGTACCAGCGAGGGCTCGGCCGGCAGCGCCGGGCTGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCGGCGCCGGCGCCGGAGCCGGGGTGGGTGCAGGCGGCGGCGGGGGCAGCGGCGCGAGCAGCGGCGGCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGGGGGCTGCAACCCAGCAGCCGCGCTGGCGGCGGCCGGCCCTCCAGCCCCAGCCCGTCGGTGGTGAGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAGAAGGAAGAGTTGGAGCGGCTGCAGAAAGAGGAGGAGGAGAGGAAGAAGAGGCTGCAGCTGTATGTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGTGATGCGCTGCATCGCCTACCCCTTTAATGCCAAGCAGCCCACCGACATGGCTCGCCGGCAGCAGAAGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCAAACAGCAGCTGCAGACAGTCAAGGACCGGTTTCAGGCTTTCCTCAATGGGGAAACCCAGATCATGGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAAGCCTTCATGAACGCTGTGCAGAGTTACTATGAGGTGTTCCTGAAGAGCGACCGTGTGGCCCGCATGGTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGTGGAGGCTGTTCCGCCAACGACTCCCGGGAGGTCTTCAAGAAGCACATTGAGAAGAGAGTGCGCAGCCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTGAGATTGACGGCCTCAGCAAGGAGACTGTGCTGAGCTCCTGGATGGCCAAATTTGATGCCATCTACCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAGAGGACCCGCGGAAGCAGCAGGCCCGGATGACAGCCAGCGCAGCCTCCGAGCTGATTCTGAGCAAGGAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTCTATGAGATGTTCCAGAACATTCTTGGGATCAAGAAGTTCGAACATCAGCTCCTTTACAATGCCTGCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGACAATCCAGATGAGCAAGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTACAAATGGCAGACCAAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCCAGGGAACGCAAATTTCCCAAGTTTGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTATCCAAAGGCGGGGAGTTCAAGCTCCAGAAACTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAACGCAGCCACAATGCTTCCATCATCGACATGGGCGAGGAGAGTGAGAACCAGCTCTCCAAGTCAGATGTCGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTGTCTTTCTCATTGGAGGTGGTAATTATGGAAGTCCAAGGCCTCAAATCTTTGGCTCCAAATCGCATCGTAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTGCACAATGGAGGTGGAAGGAGGAGAGAAACTACAGACTGATCAGGCCGAGGCTTCTAAACCAACCTGGGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCCAGGGTGACTTCTCCACAACCCATGCACTGCCAGCTGTGAAGGTGAAGCTGTTCACAGAGAGCACAGGCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTGGCGTTGGAGGACAAGGAGCTTGGGCGGGTTATTCTCCATCCCACCCCGAACAGCCCCAAACAGTCAGAGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCACAAAATGACAGTCTCCAAAAACTGCCCCGACCAAGATCTCAAAATCAAACTTGCTGTCCGAATGGATAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTCAAAACATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTGTATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AACTTCTACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCAATGCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCCATGTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGAAATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CATGGCATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTTACTTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAGACGAGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CGGGCAGAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGGAACAGTCAACAAATGCATGTGTACCTTAGTGGGCTGCCACCAAATACAGACCCTGAAGGGAGCAAAACTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCTCCCCACCTGAACCAGAAGCTAAAAAAGATACCAAAAAGGAATCCAAAAAAAGAAAAGATTCCAAAACCCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCAAATCAAGAGCTGAAAAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAAGAGAGGCTCCGAGTTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGGTGCTTTGAAAGCTACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGAGGTAAAAACAGTTATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCAAAATCGAAGAGAATCAAAAGGATGCAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATACAATACGTCTTGCTGAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGGGAAAGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCTTTGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGCAGCCTTAGAGGTGCAACCTCCAGACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTACTGACTATAATTTGTGCAATGGAAAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TATGTGGATCTGATGGAGTCCTCAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAATAATGGGTCAGGCACCTCAGAAGATCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACTGGCCTGAAGAAGAGTTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGTGTCAAAAGAACCAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCC 3404
Query 1 ----------------ATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAA 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 ACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAA 3478
Query 59 TGGGCCAAGAGTTTGCTAAAATGTGGCATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAA 132
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TGGGCCAAGA---------------GCATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAA 3537
Query 133 GAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGA 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3538 GAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGA 3611
Query 207 CGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAAC 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3612 CGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAAC 3685
Query 281 CCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAAT 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3686 CCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAAT 3759
Query 355 GAGGAGATGTACATAGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGAC 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3760 GAGGAGATGTACATAGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGAC 3833
Query 429 GGACCGGATGGACTTACAGCTTCATATTTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAG 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3834 GGACCGGATGGACTTACAGCTTCATATTTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAG 3907
Query 503 ATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3908 ATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACT 3981
Query 577 GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3982 GTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGA 4055
Query 651 AGACGAAGAAGACGAT 666
||||||||||||||||
Sbjct 4056 AGACGAAGAAGACGAT 4071
