Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11288
- Subject:
- XM_011515597.3
- Aligned Length:
- 2832
- Identities:
- 834
- Gaps:
- 1977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGAGCAGCTCGGACACGGCGCTGGGGGGAGGCGGGGGCCTGAGCTGGGCGGAGAAGAAGTTGGAGGAACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGCTGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCGCCGCAGCCGCCGCCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGCCTCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAGGGCGGCAGAAGCGGCGTCGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGCCGCAGCAGGACGGCGGTGGCGGTGCTAGTAGCGGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGAGCTCCCAGTCCGAGCAGGGGCTGCTGCTGGGGGGGGCCAGCGCGGCAACGGCGGCGACGGCTGCCGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGCGGCGCGGGGAGGGGTCGGAGCGCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGCGGGATGGGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCGGTGGCAGCGAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGCGGCAGCAGCAGCAGCAGCGGCGGCCGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGACCGGGACTCGAAGGCCCACCGCAGCCGGACTAAGTCGTCCAAGGAGCCGCCTTCGGCCTACAAGGAACCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGGCCTACAGGCGGCGGCGGTCCCTCAGCCCACTGGGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCAAGTCCCCCAGCCCGGCAGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCAGCTAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCGCCACAGCTCCTACGAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCGCAGTCCCTACAGCCCTGTGCTCAGACGGTCTGGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAGATCTCGTAGCAGGCACAGATTGTCTAGATCCAGAAGTCGTCATTCTAGTATTTCTCCTAGCACACTAACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAGCACGAGCAGCAGAGGCAGCAAGAGCCGCAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAGCTTCAAACACTTCTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACCTACCAAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAATTGAACATGCACCTTCTCCCTCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCAGGTAACGAAGGTGGAAAATAATTTGATTGTAGATAAAGCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTAAATCTGCTGCTACAAAGGAGGAATCAGTATCTCTTAAAGAGAAAACCAAACCACTTACACCAAGCATAGGA 1776
Query 1 ------------------------------------------------------------------ATGCTGCC 8
||||||||
Sbjct 1777 GCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCACCGTTACCTTTGCCTCCCATGCTGCC 1850
Query 9 TGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC 1924
Query 83 TCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAG 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAG 1998
Query 157 GAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAA 2072
Query 231 AGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT 2146
Query 305 ACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAAT 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAAT 2220
Query 379 GAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTAT 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTAT 2294
Query 453 CAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATTTTATCTGG 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATTTTATCTGG 2368
Query 527 TGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATA 2442
Query 601 AAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA 2516
Query 675 ATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATTGTATAGCT 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATTGTATAGCT 2590
Query 749 CAGAAGAAAGTCGGC--CGT--ATACT-------AACAAGGTAATTACTT--TATGGTACCGTCCACCTGAACT 809
||||||||||| || .|| ||.|| .|.|||||.|| ||| |.||| |...|||.||||| |
Sbjct 2591 CAGAAGAAAGT--GCTTGGTTGATGCTGATCTGGGAGAAGGTGAT--CTTCATCTGG-AGGATCCTCCTGA--T 2657
Query 810 GCTACTGGGAGAAGAACGATACACACCAGCCATTGA-TGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCTTC 882
|| ||| ||| ||.|.|||||| ||||.||
Sbjct 2658 GC-------AGA---------------------TGAGTGCAGGGAGCT------------TTGGGGA------- 2684
Query 883 ACTAAAAAACCTATATTTCAA----GCAAATCAGGAACTTGCACAACTAGAATTAATAAGACATGAAGAAAATG 952
|||.| ||||.|||||..||..|.| ||.
Sbjct 2685 ----------------TTCTAGTGTGCAATTCAGGCCCTACCGC--CTT------------------------- 2715
Query 953 AAGTTTCTGATAAACAAATC 972
Sbjct 2716 -------------------- 2715
