Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11288
- Subject:
- XM_017012751.2
- Aligned Length:
- 4451
- Identities:
- 962
- Gaps:
- 3484
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGAGCAGCTCGGACACGGCGCTGGGGGGAGGCGGGGGCCTGAGCTGGGCGGAGAAGAAGTTGGAGGAACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGCTGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCGCCGCAGCCGCCGCCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGCCTCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAGGGCGGCAGAAGCGGCGTCGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGCCGCAGCAGGACGGCGGTGGCGGTGCTAGTAGCGGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGAGCTCCCAGTCCGAGCAGGGGCTGCTGCTGGGGGGGGCCAGCGCGGCAACGGCGGCGACGGCTGCCGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGCGGCGCGGGGAGGGGTCGGAGCGCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGCGGGATGGGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCGGTGGCAGCGAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGCGGCAGCAGCAGCAGCAGCGGCGGCCGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGACCGGGACTCGAAGGCCCACCGCAGCCGGACTAAGTCGTCCAAGGAGCCGCCTTCGGCCTACAAGGAACCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGGCCTACAGGCGGCGGCGGTCCCTCAGCCCACTGGGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCAAGTCCCCCAGCCCGGCAGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCAGCTAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCGCCACAGCTCCTACGAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCGCAGTCCCTACAGCCCTGTGCTCAGACGGTCTGGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAGATCTCGTAGCAGGCACAGATTGTCTAGATCCAGAAGTCGTCATTCTAGTATTTCTCCTAGCACACTAACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAGCACGAGCAGCAGAGGCAGCAAGAGCCGCAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAGCTTCAAACACTTCTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACCTACCAAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAATTGAACATGCACCTTCTCCCTCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCAGGTAACGAAGGTGGAAAATAATTTGATTGTAGATAAAGCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTAAATCTGCTGCTACAAAGGAGGAATCAGTATCTCTTAAAGAGAAAACCAAACCACTTACACCAAGCATAGGA 1776
Query 1 ------------------------------------------------------------------ATGCTGCC 8
||||||||
Sbjct 1777 GCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCACCGTTACCTTTGCCTCCCATGCTGCC 1850
Query 9 TGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC 1924
Query 83 TCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAG 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAG 1998
Query 157 GAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAA 2072
Query 231 AGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT 2146
Query 305 ACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAAT 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAAT 2220
Query 379 GAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTAT 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTAT 2294
Query 453 CAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATTTTATCTGG 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATTTTATCTGG 2368
Query 527 TGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATA 2442
Query 601 AAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA 2516
Query 675 ATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATTGTATAGCT 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATTGTATAGCT 2590
Query 749 CAGAAGAA------------------------------------------------------------------ 756
||||||||
Sbjct 2591 CAGAAGAAAGTGCTTGGTTGATGCTGATCTGGGAGAAGGTGATCTTCATCTGGAGGATCCTCCTGATGCAGATG 2664
Query 757 ------------------------AGTCGGCCGTATACTAACAAGGTAATTACTTTATGGTACCGTCCACCTGA 806
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AGTGCAGGGAGCTTTGGGGATTCTAGTCGGCCGTATACTAACAAGGTAATTACTTTATGGTACCGTCCACCTGA 2738
Query 807 ACTGCTACTGGGAGAAGAACGATACACACCAGCCATTGATGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCT 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 ACTGCTACTGGGAGAAGAACGATACACACCAGCCATTGATGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCT 2812
Query 881 TCACTAAAAAACCTATATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAGACATGAAGAAAA---- 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| |||.|
Sbjct 2813 TCACTAAAAAACCTATATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAGCC-----GAATATGTG 2881
Query 951 -------------TGAAGTTT---CTGA--TAAACAAA----------TC------------------------ 972
||.|||.| |||| |||.|||| ||
Sbjct 2882 GGAGTCCATGTCCTGCAGTGTGGCCTGATGTAATCAAACTACCATATTTCAACACCATGAAACCAAAGAAGCAA 2955
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2956 TATCGTCGAAAGTTAAGAGAAGAATTTGTTTTTATTCCTGCAGCTGCGCTAGACTTATTTGATTACATGCTTGC 3029
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3030 CTTGGATCCTAGTAAGCGCTGCACTGCTGAACAGGCTCTTCAGTGCGAGTTCCTCCGAGATGTGGAACCCTCAA 3103
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3104 AAATGCCTCCACCAGATCTCCCTTTATGGCAAGATTGTCATGAGTTATGGAGTAAAAAGCGAAGAAGACAGAAG 3177
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3178 CAGATGGGCATGACTGATGATGTTTCCACAATTAAAGCCCCCAGGAAGGACTTGTCTCTGGGCTTGGATGACAG 3251
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3252 CAGAACCAACACACCCCAGGGTGTGCTGCCATCTTCACAGCTGAAATCTCAGGGCAGCTCAAATGTGGCACCTG 3325
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3326 GTGAAAAACAGACAGATCCATCAACACCACAACAGGAGTCTTCGAAACCGTTGGGAGGAATTCAGCCTTCTTCT 3399
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3400 CAGACCATCCAGCCTAAAGTGGAGACTGATGCTGCCCAGGCGGCTGTGCAGAGTGCATTTGCAGTTCTGTTGAC 3473
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3474 TCAGTTAATAAAGGCTCAGCAGTCAAAGCAGAAAGATGTGCTACTAGAAGAGAGGGAAAATGGATCGGGACATG 3547
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3548 AAGCGTCATTACAACTCAGGCCACCTCCAGAACCTAGCACTCCGGTGTCGGGACAAGATGACCTCATCCAGCAT 3621
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3622 CAAGATATGAGGATCTTGGAGCTAACGCCAGAACCAGACCGGCCTCGAATTCTGCCTCCTGACCAACGACCTCC 3695
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3696 CGAGCCTCCTGAACCACCACCAGTCACTGAGGAAGATCTAGATTATCGGACAGAAAACCAGCATGTACCCACCA 3769
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3770 CCAGTTCTTCATTAACTGACCCTCATGCCGGAGTGAAGGCAGCCCTGTTACAGCTGCTTGCTCAGCATCAGCCC 3843
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3844 CAGGATGACCCCAAAAGAGAAGGTGGGATTGATTATCAAGCAGGAGACACTTACGTGTCCACTTCAGACTACAA 3917
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3918 GGACAACTTTGGATCCTCTTCTTTCTCTTCTGCTCCTTATGTTAGCAATGATGGTCTAGGAAGCAGTTCTGCTC 3991
Query 973 -------------------------------------------------------------------------- 972
Sbjct 3992 CACCACTAGAACGACGTAGTTTCATTGGAAATTCAGATATTCAGTCTTTGGATAACTACAGTACTGCTTCATCT 4065
Query 973 -------------------------------------------------------------------------- 972
Sbjct 4066 CATTCTGGTGGTCCACCTCAGCCTTCTGCCTTTTCTGAGTCATTTCCCAGTTCAGTAGCTGGATATGGAGACAT 4139
Query 973 -------------------------------------------------------------------------- 972
Sbjct 4140 TTACCTCAATGCTGGTCCCATGTTGTTTAGTGGAGACAAGGACCATAGATTTGAATATAGCCATGGTCCTATTG 4213
Query 973 -------------------------------------------------------------------------- 972
Sbjct 4214 CAGTCCTGGCAAACAGCAGTGACCCTTCCACGGGGCCAGAGAGTACTCATCCTTTGCCAGCAAAGATGCACAAC 4287
Query 973 -------------------------------------------------------------------------- 972
Sbjct 4288 TATAACTATGGTGGTAACTTACAGGAAAATCCGAGTGGCCCCAGCCTCATGCATGGACAGACCTGGACTTCTCC 4361
Query 973 -------------------------------------------------------------------------- 972
Sbjct 4362 TGCCCAAGGACCTGGATATTCACAAGGATACAGGGGACATATTAGCACATCAACTGGCAGAGGCAGAGGCAGAG 4435
Query 973 ----------- 972
Sbjct 4436 GGTTACCATAC 4446
