Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11327
Subject:
XM_005257771.3
Aligned Length:
3994
Identities:
320
Gaps:
3635

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGCTGGAGGACGGTGTGGTGTATCAGGAGGAGCCCGGCGGCTCCGGGGCCGTGATGTCGGAGCGGGTGTC  74

Query    1  --------------------------------------------------ATGA----------GTC------C  8
                                                              ||||          |||      |
Sbjct   75  CGGCCTGGCCGGCTCCATCTACCGCGAGTTCGAGCGGCTTATCGGGCGCTATGACGAGGAGGTGGTCAAAGAGC  148

Query    9  TGGATGCATGCTGCTGTTTGTGTTTG-GCT----------------TTGTTGGCG--GGGC-----------GG  52
            ||     ||||.||||.|.|||..|| |||                .||||.|||  ||.|           ||
Sbjct  149  TG-----ATGCCGCTGGTGGTGGCTGTGCTGGAGAACCTGGACTCGGTGTTCGCGCAGGACCAGGAGCACCAGG  217

Query   53  TGG-----------------------------------------------------------------------  55
            |||                                                                       
Sbjct  218  TGGAGCTGGAGCTGCTGCGGGACGACAACGAGCAGCTCATCACCCAGTACGAGCGGGAGAAGGCGCTGCGCAAG  291

Query   56  ----------------TCATT-AATTCTG----CTATC------------------------------------  72
                            ||||| |||| ||    ||.||                                    
Sbjct  292  CACGCTGAGGAGAAATTCATTGAATT-TGAAGACTCTCAAGAACAGGAAAAAAAGGACTTACAGACCCGAGTGG  364

Query   73  -----TTAGTATCTC----------TCT----CTG-----------TTTTGCTG--------------CTTG--  100
                 ||||.|||||          .||    |||           .|.|||||              ||||  
Sbjct  365  AATCTTTAGAATCTCAAACAAGACAACTTGAGCTGAAAGCGAAAAACTATGCTGACCAGATTAGCAGACTTGAA  438

Query  101  --------------------------------TGCACTTTTC-------------------------TATTTCT  117
                                            ||||  ||.|                         ||.||.|
Sbjct  439  GAAAGAGAAGCAGAACTGAAGAAGGAATATAATGCA--TTACATCAAAGACACACTGAGATGATCCATAATTAT  510

Query  118  ACCGGTG----------------------TGC--CAGCTCTGACGCAG-----AACCTA----CCA--------  150
            |    ||                      |.|  |||||||.|.|.||     || |||    |||        
Sbjct  511  A----TGGAACATTTAGAAAGAACAAAACTTCATCAGCTCTCAGGGAGTGATCAA-CTAGAATCCACAGCTCAT  579

Query  151  AGGATACTCAGAAAAGAACGCCCTATATCATTAGGAATTTTCCCATTACCTGCTGGAGATGGATTGCTTACACC  224
            ||.|.|.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  580  AGTAGAATTAGAAAAGAACGCCCTATATCATTAGGAATTTTCCCATTACCTGCTGGAGATGGATTGCTTACACC  653

Query  225  TGATGCTCAGAAAGGAGGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACCACGTTCTC  298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  654  TGATGCTCAGAAAGGAGGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACCACGTTCTC  727

Query  299  ATACCAGCCTGAAG---------------GTCAGCAATAGTC----CTGAACCT--CAGAAGGCTGTAG----A  347
            ||||||||||||||               ||.|||.| ||.|    ||.||.||  ||     ||..||    |
Sbjct  728  ATACCAGCCTGAAGGATGAGCTTTCTGATGTTAGCCA-AGGCGGATCTAAAGCTACCA-----CTCCAGCATCA  795

Query  348  ACAGGAGGTGAGAATGGTGCTTCTTAACATTTTGCAAAAAGT-------ATAC---------------------  393
            |||               |||..||.|.||.|.||||.||.|       ||||                     
Sbjct  796  ACA---------------GCTAATTCAGATGTGGCAACAATTCCTACTGATACTCCCTTAAAGGAAGAAAACGA  854

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct  855  AGGATTTGTGAAGGTTACAGATGCGCCAAATAAATCAGAGATAAGCAAACACATTGAAGTACAGGTAGCCCAGG  928

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct  929  AAACTAGAAATGTATCTACTGGCTCTGCTGAAAATGAAGAAAAGTCAGAAGTTCAAGCAATCATCGAATCTACT  1002

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1003  CCTGAGCTGGATATGGACAAAGATCTCAGTGGATATAAAGGTTCAAGCACTCCCACCAAAGGCATAGAGAACAA  1076

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1077  AGCTTTTGATCGCAATACAGAATCTCTCTTTGAAGAACTGTCTTCAGCTGGCTCAGGCCTAATAGGAGATGTGG  1150

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1151  ATGAAGGAGCAGATTTACTAGGAATGGGTCGGGAAGTTGAGAATCTTATATTAGAAAATACACAACTGTTGGAA  1224

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1225  ACCAAAAATGCTTTGAACATAGTGAAGAATGATTTGATAGCAAAAGTGGATGAACTGACCTGTGAGAAAGATGT  1298

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1299  GCTGCAAGGGGAATTGGAGGCTGTGAAGCAAGCCAAACTGAAACTAGAGGAAAAGAACAGAGAATTGGAGGAAG  1372

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1373  AGCTTAGGAAAGCTCGGGCAGAAGCTGAAGATGCAAGGCAAAAAGCAAAAGATGACGATGATAGTGATATTCCC  1446

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1447  ACAGCCCAGAGGAAACGGTTTACTAGAGTAGAAATGGCCCGTGTTCTCATGGAGCGAAACCAGTATAAAGAGAG  1520

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1521  ATTGATGGAGCTTCAGGAAGCTGTTCGATGGACAGAGATGATTCGGGCATCACGAGAAAATCCAGCCATGCAGG  1594

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1595  AAAAAAAAAGGTCAAGCATTTGGCAGTTTTTCAGCCGACTTTTCAGCTCCTCAAGTAACACGACTAAGAAGCCT  1668

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1669  GAACCACCTGTTAATCTGAAGTACAATGCACCCACGTCTCATGTTACTCCGTCCGTCAAGAAAAGAAGCAGCAC  1742

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1743  CTTATCTCAGCTCCCTGGGGATAAGTCCAAAGCCTTTGATTTCCTTAGTGAAGAAACTGAAGCTAGTTTAGCCT  1816

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1817  CACGCAGAGAACAAAAGAGAGAGCAGTATCGTCAGGTAAAAGCACATGTTCAGAAGGAAGACGGTAGAGTGCAG  1890

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1891  GCTTTTGGCTGGAGTCTGCCTCAGAAGTACAAACAGGTAACCAATGGTCAAGGTGAAAATAAGATGAAAAATTT  1964

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 1965  ACCTGTGCCTGTCTATCTCAGACCTCTGGATGAAAAAGATACATCAATGAAGCTGTGGTGTGCTGTTGGAGTCA  2038

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2039  ATTTATCTGGTGGGAAGACCAGAGATGGTGGTTCTGTTGTTGGAGCAAGTGTATTTTACAAGGATGTTGCTGGT  2112

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2113  TTGGATACAGAAGGCAGTAAACAGCGAAGTGCCTCTCAGAGTAGTTTAGATAAGTTAGATCAGGAACTTAAGGA  2186

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2187  ACAGCAGAAGGAGTTAAAAAATCAAGAAGAATTATCCAGTCTAGTTTGGATCTGTACCAGCACTCATTCGGCTA  2260

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2261  CAAAAGTTCTTATTATTGATGCTGTTCAACCTGGCAACATCCTAGACAGTTTCACTGTTTGCAACTCTCATGTT  2334

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2335  CTGTGCATTGCAAGTGTGCCAGGTGCACGAGAAACAGACTACCCTGCAGGAGAAGATCTTTCAGAATCTGGTCA  2408

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2409  GGTAGACAAAGCATCTTTATGTGGAAGTATGACAAGCAACAGCTCAGCAGAGACAGACAGCCTGTTAGGAGGCA  2482

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2483  TCACAGTGGTTGGTTGTTCTGCAGAAGGTGTGACGGGAGCTGCCACTTCCCCTAGTACAAATGGTGCTTCTCCA  2556

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2557  GTGATGGATAAACCACCAGAAATGGAAGCAGAAAATAGTGAGGTTGATGAAAATGTTCCAACAGCAGAAGAAGC  2630

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2631  AACTGAAGCTACAGAAGGGAATGCGGGGTCAGCTGAAGACACAGTGGACATCTCCCAAACTGGCGTCTACACAG  2704

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2705  AGCATGTCTTTACAGATCCTTTGGGAGTTCAGATCCCAGAAGACCTCTCCCCAGTGTATCAGTCGAGCAATGAC  2778

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2779  TCAGATGCATATAAAGATCAAATATCAGTACTGCCAAATGAACAAGACTTGGTGAGAGAAGAAGCCCAGAAAAT  2852

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2853  GAGTAGTCTTTTACCAACTATGTGGCTTGGAGCTCAAAATGGCTGTTTGTATGTCCATTCATCTGTAGCCCAGT  2926

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 2927  GGAGGAAATGTCTCCATTCCATTAAACTTAAAGATTCGATTCTCAGTATTGTACACGTGAAGGGAATCGTGTTA  3000

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3001  GTAGCCCTGGCTGACGGCACCCTTGCAATCTTTCACAGAGGAGTGGATGGGCAGTGGGATTTGTCAAACTATCA  3074

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3075  CCTCTTAGACCTTGGACGGCCTCATCATTCCATCCGTTGCATGACTGTGGTACATGACAAAGTCTGGTGTGGCT  3148

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3149  ATAGGAACAAAATCTATGTGGTGCAGCCAAAGGCCATGAAAATAGAGAAATCTTTTGATGCACATCCCAGGAAG  3222

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3223  GAGAGCCAAGTGCGACAGCTTGCGTGGGTGGGGGATGGCGTGTGGGTCTCCATTCGCTTGGATTCTACGCTCCG  3296

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3297  TCTCTATCATGCACACACTTATCAACATCTACAGGATGTGGACATTGAGCCTTATGTAAGCAAAATGTTAGGTA  3370

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3371  CTGGAAAACTGGGCTTCTCTTTTGTGAGAATTACAGCTCTTATGGTGTCTTGTAATCGTTTGTGGGTGGGGACA  3444

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3445  GGAAATGGTGTCATTATCTCCATCCCATTGACAGAAACCGTAATCCTCCACCAGGGACGTTTACTGGGGCTGAG  3518

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3519  GGCAAATAAAACCTCAGGTGTACCAGGAAATCGTCCTGGAAGTGTAATCCGTGTATATGGTGATGAAAACAGTG  3592

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3593  ATAAAGTGACTCCAGGGACATTTATACCCTATTGTTCAATGGCACATGCACAGCTTTGCTTCCATGGGCACCGG  3666

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3667  GATGCTGTGAAATTCTTTGTGGCAGTCCCAGGTCAAGTCATCAGCCCACAAAGTAGCAGTAGTGGCACGGATCT  3740

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3741  GACGGGTGACAAAGCAGGGCCATCTGCACAGGAGCCTGGTAGTCAGACGCCCTTGAAGTCTATGCTTGTCATCA  3814

Query  394  --------------------------------------------------------------------------  393
                                                                                      
Sbjct 3815  GTGGAGGAGAGGGCTACATCGACTTCCGAATGGGTGATGAAGGTGGAGAATCAGAACTTCTTGGAGAGGATCTT  3888

Query  394  ------------------------------------------------------------------------  393
                                                                                    
Sbjct 3889  CCACTTGAACCTTCTGTCACCAAAGCAGAAAGGAGTCACTTGATAGTGTGGCAAGTGATGTATGGCAATGAG  3960

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