Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11327
- Subject:
- XM_006534217.3
- Aligned Length:
- 3564
- Identities:
- 357
- Gaps:
- 3177
Alignment
Query 1 ATGAGTCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCTATCTT 74
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGAATCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCGATCTT 74
Query 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGTGTGCCAGCTCTGACGCAGAACCTAC 148
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGGGTGCCAGCGCTGACGCAGAACCTAC 148
Query 149 CAAGGATACTCAGAAAAGAACGCCCTATATCATTAGGAATTTTCCCATTACCTGCTGGAGATGGATTGCTTACA 222
||||||||||||||||||||||.||||||||||||||.||||||||..||||||||||||||||||||||||||
Sbjct 149 CAAGGATACTCAGAAAAGAACGTCCTATATCATTAGGGATTTTCCCTCTACCTGCTGGAGATGGATTGCTTACA 222
Query 223 CCTGATGCTCAGAAAGGAGGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACCACGTTC 296
|||||..|||||||||||||.||||||||.|||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 223 CCTGACACTCAGAAAGGAGGCGAGACCCCAGGATCAGAGCAATGGAAATTTCAAGAATTAAGTCAACCACGTTC 296
Query 297 TCATACCAGCCTGAAGG--------TCAG-CAATAGTC---------CTGAACCT--CAGAAGGCTGTAG---- 346
||||||||||||||||| ||.| .|.||||| ||.||.|| || ||..||
Sbjct 297 TCATACCAGCCTGAAGGATGAACTTTCTGATATTAGTCAAGGTGGATCTAAAGCTACCA-----CTCCAGCTTC 365
Query 347 AACAG--------GAGG--TGAGAA--------TGGTGCTTCTT------AACAT---------TTTGCAAAA- 386
||||| ||.| |.||.| ||.|.||.|.| ||.|| ||||.||||
Sbjct 366 AACAGCAAATTCAGACGTATCAGCAATTCCTCCTGATACTCCGTCAAAGGAAGATAATGAAGGATTTGTAAAAG 439
Query 387 ----AGTATAC--------------------------------------------------------------- 393
|| ||||
Sbjct 440 GCACAG-ATACATCAAATAAGTCAGAGATAAGCAAACACATAGAAGTCCAGGTTGCCCAAGAGACTAGGAATGT 512
Query 394 -------------------------------------------------------------------------- 393
Sbjct 513 GTCTACAGAATCTGGTGAAAATGAAGAGAAATCAGAAGTTCAAGCAATCATTGAATCCACTCCTGAATTGGATA 586
Query 394 -------------------------------------------------------------------------- 393
Sbjct 587 TGGACAAAGACCTCAGTGGATATAAAGGTTCAAGCACTCCCACCAAAGGCATAGAGAACAAAGCTTTTGATCGC 660
Query 394 -------------------------------------------------------------------------- 393
Sbjct 661 AATACAGAATCTCTCTTTGAAGAGCTGTCCTCAGCTGGCTCGGGCCTTATTGGAGATGTGGATGAAGGAGCGGA 734
Query 394 -------------------------------------------------------------------------- 393
Sbjct 735 TTTACTAGGGGAATATTCTGACCATAATTTCTTTGGAATGGGTCGTGAGGTGGAGAATCTCATACTGGAGAACA 808
Query 394 -------------------------------------------------------------------------- 393
Sbjct 809 CACAGCTGCTGGAAACCAAAAACGCTCTGAATGTAGTGAAGAATGACTTAATAGCCAAAGTGGATGAGCTGACC 882
Query 394 -------------------------------------------------------------------------- 393
Sbjct 883 TGTGAGAAGGACGTGCTGCAGGGGGAGCTGGAGGCTGTGAAGCAAGCCAAGCTGAAGCTGGAGGACAAGAACAG 956
Query 394 -------------------------------------------------------------------------- 393
Sbjct 957 AGAGCTGGAGGAGGAGCTCAGGAAAGCTCGTGCAGAAGCTGAAGATGCAAGGCAAAAAGCAAAAGACGATGATG 1030
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1031 ATAGTGACATTCCCACAGCCCAGAGGAAGAGGTTTACCAGAGTAGAAATGGCCCGAGTTCTCATGGAGAGAAAC 1104
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1105 CAGTACAAAGAGAGGCTGATGGAGCTTCAAGAAGCTGTTCGATGGACGGAGATGATCCGGGCCTCACGAGAGAA 1178
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1179 CCCAGCTATGCAAGAAAAGAAAAGGTCAAGCATCTGGCAATTTTTCAGCCGACTTTTTAGCTCTTCAAGTAATG 1252
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1253 CAACAAAGAAGCCTGAACCCCCTGTTAACCTGAAGTACAACGCCCCCACCTCTCACGTGACTCCCTCCGTGAAG 1326
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1327 AAAAGGAGCAGCACTTTATCTCAGCTCCCTGGGGACAAGTCCAAGGCATTTGATTTCCTCAGTGAGGAAACTGA 1400
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1401 GGCTAGTTTAGCCTCCCGCAGAGAGCAAAAGAGAGAGCAGTATCGGCAGGTGAAGGCTCACGTTCAGAAGGAAG 1474
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1475 ATGGCCGAGTGCAAGCTTTCGGCTGGAGTCTGCCTCAGAAGTACAAACAGGTAGCCAATGGTCAAGGGGAAACT 1548
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1549 AAGATGAAAAATTTACCTGTGCCTGTCTATCTCAGACCACTAGACGAAAAAGATGCGTCTATGAAGCTGTGGTG 1622
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1623 TGCTGTAGGAGTCAATTTATCTGGTGGCAAGACAAGAGATGGCGGGTCTGTTGTTGGAGCGAGTGTATTTTACA 1696
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1697 AGGATATTGCTGGTTTGGACACTGAAGGCAGTAAACAGCGGAGTGCGTCTCAGAGTAGTTTAGACAAGTTGGAT 1770
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1771 CAAGAACTCAAGGAACAGCAGAAAGAATTTAAAAATCAAGAAGAGTTGTCCAGTCAGGTCTGGATCTGTACCAG 1844
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1845 CACCCACTCAACTACAAAGGTTATCATCATTGATGCTGTTCAGCCTGGCAACATCCTAGATAGTTTCACTGTTT 1918
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1919 GCAATTCTCATGTTCTGTGCATTGCCAGTGTCCCAGGAGCTCGGGAAACAGACTACCCTGCAGGAGAAGAACTT 1992
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1993 TCTGAATCTGGTCAGGTAGACAAAGCGTCATTGTGTGGAAGCATGACCAGTAACAGCTCCGCAGAGATGGACAG 2066
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2067 CTTGCTGGGAGGCATCACAGTGGTTGGGTGCTCCACAGAAGGACTGACAGGAGCTGCCACTTCCCCAAGTACCA 2140
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2141 ACGGTGCTTCTCCTGTGATTGAAAAGCCACCAGAAATGGAAACTGAAAATAGCGAAGTTGATGAAAATATTCCA 2214
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2215 ACAGCAGAAGAAGCAACTGAAGCCACAGAGGGCAATGCAGGGTCCACTGAAGACACTGTGGACATCTCCCAGCC 2288
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2289 TGGCGTGTACACAGAGCATGTGTTTACAGATCCACTGGGAGTTCAGATCCCAGAAGACCTCTCCCCAGTGTTTC 2362
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2363 AGTCAAGTAATGACTCAGATGTGTACAAAGATCAAATATCAGTATTGCCAAATGAACAAGACCTTGCGAGAGAA 2436
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2437 GAAGCTCAGAAAATGAGTAGTCTTTTACCAACCATGTGGCTTGGAGCTCAGAATGGCTGTTTGTATGTCCACTC 2510
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2511 ATCTGTAGCCCAGTGGAGGAAATGTCTCCATTCCATTAAGCTCAAAGACTCAATTCTCAGTATTGTACATGTGA 2584
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2585 AAGGAATTGTACTAGTGGCCCTGGCGGATGGCACCCTTGCAATCTTCCACAGAGGAGTTGATGGACAATGGGAT 2658
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2659 CTGTCAAACTATCACCTTTTAGACCTTGGACGTCCTCATCATTCCATACGATGCATGACTGTGGTACATGACAA 2732
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2733 AGTCTGGTGTGGCTATAGGAACAAAATCTATGTGGTTCAACCAAAGGCTATGAAGATAGAGAAATCATTTGATG 2806
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2807 CACACCCCAGGAAGGAGAGCCAAGTACGGCAGCTTGCATGGGTGGGTGATGGTGTATGGGTCTCCATTCGTTTG 2880
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2881 GATTCCACGCTCCGCCTCTATCATGCACACACATACCAACATCTCCAGGATGTGGATATTGAGCCTTATGTAAG 2954
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2955 CAAAATGTTAGGTACTGGAAAACTGGGTTTCTCTTTCGTGAGGATAACAGCTCTTATGGTGTCTTGCAATCGTT 3028
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3029 TGTGGGTGGGGACTGGAAATGGTGTCATTATCTCCATCCCACTGACAGAAACCGTAATCCTCCACCAGGGACGT 3102
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3103 TTACTGGGGCTAAGGGCAAATAAAACCTCAGGGACTCCAGGTAACCGTCCTGGAAGTGTAATCCGTGTATATGG 3176
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3177 TGATGAGAACAGTGATAAAGTGACTCCAGGGACATTTATACCCTACTGTTCAATGGCACATGCACAGCTTTGTT 3250
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3251 TCCACGGGCACCGGGATGCTGTGAAATTCTTTGTGGCAGTCCCAGGTCAGGTCATTAGCCCACAAAGTAGCAGT 3324
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3325 GGTGGGGCAGATCTTACAGCTGACAAGGCAGGGTCATCTGCACAGGAGCCCAGTAGCCAGACGCCCTTGAAGTC 3398
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3399 CATGCTTGTCATCAGTGGAGGAGAGGGCTACATTGACTTCCGGATGGGTGATGAAGGTGGAGAATCTGAACTTC 3472
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3473 TGGGAGAGGATCTTCCACTGGAACCTTCAGTCACCAAAGCCGAGAGGAGTCACCTGATAGTGTGGCAAGTGATG 3546
Query 394 ------------ 393
Sbjct 3547 TGTGGCAATGAA 3558
