Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11333
- Subject:
- XM_011524050.1
- Aligned Length:
- 4401
- Identities:
- 489
- Gaps:
- 3912
Alignment
Query 1 ------ATGGTAGAGAATGCAGATAGTTTGCAGGCACAGGAGCGGAAGGACATACTTATGAAGTATGACAAGGG 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACATGGTAGAGAATGCAGATAGTTTGCAGGCACAGGAGCGGAAGGACATACTTATGAAGTATGACAAGGG 74
Query 69 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTGAGCCCGTTGGAATCAACAGCAGCATTGATCGTTTTGGCA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTGAGCCCGTTGGAATCAACAGCAGCATTGATCGTTTTGGCA 148
Query 143 TTTTGCAGTCCTGCCCCTCCTGGGAGTCAGAGCCACAGGAAGGCCCTTGTCCTCCCTTCCCTGTGCCTTCTCCC 216
|||||||
Sbjct 149 TTTTGCA------------------------------------------------------------------- 155
Query 217 GGGCTGAGCCCTGAGCTGGATAGGGACAGAGCCAGTCCTTTCTGGGGGTCGGCTCCCAGGCTTGGGCGGCTCCA 290
Sbjct 156 -------------------------------------------------------------------------- 155
Query 291 GGCCCTGTGCACGTCCTCAGCTCTGCCTGGGTTGCCTTACAGTGAGACGGAGCTGCCTCCTGTGACTGCACGGG 364
||||||||||||||||||||||||||||||||
Sbjct 156 ------------------------------------------TGAGACGGAGCTGCCTCCTGTGACTGCACGGG 187
Query 365 AGGCGAAGAAAATTCGGCGGGAGATGACACGAACGAGCAAGTGGATGGAAATGCTGGGAGAATGGGAGACATAT 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 AGGCGAAGAAAATTCGGCGGGAGATGACACGAACGAGCAAGTGGATGGAAATGCTGGGAGAATGGGAGACATAT 261
Query 439 AAGCACAGTAGCAAACTCATAGATCGAGTGTACAAGGGAATTCCCATGAACATCCGGGGCCCGGTGTGGTCAGT 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 AAGCACAGTAGCAAACTCATAGATCGAGTGTACAAGGGAATTCCCATGAACATCCGGGGCCCGGTGTGGTCAGT 335
Query 513 CCTCCTGAACATTCAGGAAATCAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAGGGGCAAGAGGT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CCTCCTGAACATTCAGGAAATCAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAGGGGCAAGAGGT 409
Query 587 CATCTGAACACATCCACCACATCGACCTGGACGTGAGGACGACTCTCCGGAACCATGTCTTCTTTAGGGATCGA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 CATCTGAACACATCCACCACATCGACCTGGACGTGAGGACGACTCTCCGGAACCATGTCTTCTTTAGGGATCGA 483
Query 661 TATGGAGCCAAG-------------------------------------------------------------- 672
||||||||||||
Sbjct 484 TATGGAGCCAAGCAGAGGGAACTATTCTACATCCTCCTGGCCTATTCGGAGTATAACCCGGAGGTGGGCTACTG 557
Query 673 -------------------------------------------------------------------------- 672
Sbjct 558 CAGGGACCTGAGCCACATCACCGCCTTGTTCCTCCTTTATCTGCCTGAGGAGGACGCATTCTGGGCACTGGTGC 631
Query 673 -------------------------------------------------------------------------- 672
Sbjct 632 AGCTGCTGGCCAGTGAGAGGCACTCCCTGCCAGGATTCCACAGCCCAAATGGTGGGACAGTCCAGGGGCTCCAA 705
Query 673 -------------------------------------------------------------------------- 672
Sbjct 706 GACCAACAGGAGCATGTGGTACCCAAGTCACAACCCAAGACCATGTGGCATCAGGACAAGGAAGGTCTATGCGG 779
Query 673 -------------------------------------------------------------------------- 672
Sbjct 780 GCAGTGTGCCTCGTTAGGCTGCCTTCTCCGGAACCTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCCTGT 853
Query 673 -------------------------------------------------------------------------- 672
Sbjct 854 GGGACGTGTATTTGGTGGAAGGAGAACAGGTGTTGATGCCAATAACCAGCATTGCTCTTAAGGTTCAGCAGAAG 927
Query 673 -------------------------------------------------------------------------- 672
Sbjct 928 CGCCTCATGAAGACATCCAGGTGTGGCCTGTGGGCACGTCTGCGGAACCAATTCTTCGATACCTGGGCCATGAA 1001
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1002 CGATGACACCGTGCTCAAGCATCTTAGGGCCTCTACGAAGAAACTAACAAGGAAGCAAGGGGACCTGCCACCCC 1075
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1076 CAGCCAAACGCGAGCAAGGGTCCTTGGCACCCAGGCCTGTGCCGGCTTCACGTGGTGGGAAGACCCTCTGCAAG 1149
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1150 GGGTATAGGCAGGCCCCTCCAGGCCCACCAGCCCAGTTCCAGCGGCCCATTTGCTCAGCTTCCCCGCCATGGGC 1223
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1224 ATCTCGTTTTTCCACGCCCTGTCCTGGTGGGGCTGTCCGGGAAGACACGTACCCTGTGGGCACTCAGGGTGTGC 1297
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1298 CCAGCCTGGCCCTGGCTCAGGGAGGACCTCAGGGTTCCTGGAGATTCCTGGAGTGGAAGTCAATGCCCCGGCTC 1371
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1372 CCAACGGACCTGGATATAGGGGGCCCTTGGTTCCCCCATTATGATTTTGAATGGAGCTGCTGGGTCCGTGCCAT 1445
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1446 ATCCCAGGAGGACCAGCTGGCCACCTGCTGGCAGGCTGAACACTGCGGAGAGGTTCACAACAAAGATATGAGTT 1519
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1520 GGCCTGAGGAGATGTCTTTTACAGCAAATAGTAGTAAAATAGATAGACAAAAGGTTCCCACAGAAAAGGGAGCC 1593
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1594 ACAGGTCTAAGCAACCTGGGAAACACATGCTTCATGAACTCAAGCATCCAGTGCGTTAGTAACACACAGCCACT 1667
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1668 GACACAGTATTTTATCTCAGGGAGACATCTTTATGAACTCAACAGGACAAATCCCATTGGTATGAAGGGGCATA 1741
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1742 TGGCTAAATGCTATGGTGATTTAGTGCAGGAACTCTGGAGTGGAACTCAGAAGAGTGTTGCCCCATTAAAGCTT 1815
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1816 CGGCGGACCATAGCAAAATATGCTCCCAAGTTTGATGGGTTTCAGCAACAAGACTCCCAAGAACTTCTGGCTTT 1889
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1890 TCTCTTGGATGGTCTTCATGAAGATCTCAACCGAGTCCATGAAAAGCCATATGTGGAACTGAAGGACAGTGATG 1963
Query 673 -------------------------------------------------------------------------- 672
Sbjct 1964 GCCGACCAGACTGGGAAGTAGCTGCAGAGGCCTGGGACAACCATCTAAGAAGAAATAGATCAATTATTGTGGAT 2037
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2038 TTGTTCCATGGGCAGCTAAGATCTCAAGTCAAATGCAAGACATGTGGGCATATAAGTGTCCGATTTGACCCTTT 2111
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2112 CAATTTTTTGTCTTTGCCACTACCAATGGACAGTTACATGGACTTAGAAATAACAGTGATTAAGTTAGATGGTA 2185
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2186 CTACCCCTGTACGGTATGGACTAAGACTGAATATGGATGAAAAGTACACAGGTTTAAAAAAACAGCTGAGGGAT 2259
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2260 CTCTGTGGACTTAATTCAGAACAAATCCTACTAGCAGAAGTACATGATTCCAACATAAAGAACTTTCCTCAGGA 2333
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2334 TAACCAAAAAGTACAACTCTCAGTGAGCGGATTTTTGTGTGCATTTGAAATTCCTGTCCCTTCATCTCCAATTT 2407
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2408 CAGCTTCTAGTCCAACACAAATAGATTTCTCCTCTTCACCATCTACAAATGGAATGTTCACCCTAACTACCAAT 2481
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2482 GGGGACCTACCCAAACCAATATTCATCCCCAATGGAATGCCAAACACTGTTGTGCCATGTGGAACTGAGAAGAA 2555
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2556 CTTCACAAATGGAATGGTTAATGGTCACATGCCATCTCTTCCTGACAGCCCCTTTACAGGTTACATCATTGCAG 2629
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2630 TCCACCGAAAAATGATGAGGACAGAACTGTATTTCCTGTCACCTCAGGAGAATCGCCCCAGCCTCTTTGGAATG 2703
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2704 CCATTGATTGTTCCATGCACTGTGCATACCCGGAAGAAAGACCTATATGATGCGGTTTGGATTCAAGTATCCTG 2777
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2778 GTTAGCAAGACCACTCCCACCTCAGGAAGCTAGTATTCATGCCCAGGATCGTGATAACTGTATGGGCTATCAAT 2851
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2852 ATCCATTCACTCTACGAGTTGTGCAGAAAGATGGGAACTCCTGTGCTTGGTGCCCACAGTATAGATTTTGCAGA 2925
Query 673 -------------------------------------------------------------------------- 672
Sbjct 2926 GGCTGTAAAATTGATTGTGGGGAAGACAGAGCTTTCATTGGAAATGCCTATATTGCTGTGGATTGGCACCCCAC 2999
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3000 AGCCCTTCACCTTCGCTATCAAACATCCCAGGAAAGGGTTGTAGATAAGCATGAGAGTGTGGAGCAGAGTCGGC 3073
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3074 GAGCGCAAGCCGAGCCCATCAACCTGGACAGCTGTCTCCGTGCTTTCACCAGTGAGGAAGAGCTAGGGGAAAGT 3147
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3148 GAGATGTACTACTGTTCCAAGTGTAAGACCCACTGCTTAGCAACAAAGAAGCTGGATCTCTGGAGGCTTCCACC 3221
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3222 CTTCCTGATTATTCACCTTAAGCGATTTCAATTTGTAAATGATCAGTGGATAAAATCACAGAAAATTGTCAGAT 3295
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3296 TTCTTCGGGAAAGTTTTGATCCGAGTGCTTTTTTGGTACCACGAGACCCGGCCCTCTGCCAGCATAAACCACTC 3369
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3370 ACACCCCAGGGGGATGAGCTCTCCAAGCCCAGGATTCTGGCAAGAGAGGTGAAGAAAGTGGATGCGCAGAGTTC 3443
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3444 GGCTGGAAAAGAGGACATGCTCCTAAGCAAAAGCCCATCCTCACTCAGCGCTAACATCAGCAGCAGCCCAAAAG 3517
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3518 GTTCTCCTTCTTCATCAAGAAAAAGTGGAACCAGCTGTCCCTCCAGCAAAAACAGCAGCCCTAATAGCAGCCCA 3591
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3592 CGGACTTTGGGGAGGAGCAAAGGGAGGCTCCGGCTGCCCCAGATTGGCAGCAAAAATAAGCCGTCAAGTAGTAA 3665
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3666 GAAGAACTTGGATGCCAGCAAAGAGAATGGGGCTGGGCAGATCTGTGAGCTGGCTGACGCCTTGAGCCGAGGGC 3739
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3740 ATATGCGGGGGGGCAGCCAACCAGAGCTGGTCACTCCTCAGGACCATGAGGTAGCTTTGGCCAATGGATTCCTT 3813
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3814 TATGAGCATGAAGCATGTGGCAATGGCTGTGGCGATGGCTACAGCAATGGTCAGCTTGGAAACCACAGTGAAGA 3887
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3888 AGACAGCACTGATGACCAAAGAGAAGACACTCATATTAAGCCTATTTATAATCTATATGCAATTTCATGCCATT 3961
Query 673 -------------------------------------------------------------------------- 672
Sbjct 3962 CAGGAATTCTGAGTGGGGGCCATTACATCACTTATGCCAAAAACCCAAACTGCAAGTGGTACTGTTATAATGAC 4035
Query 673 -------------------------------------------------------------------------- 672
Sbjct 4036 AGCAGCTGTGAGGAACTTCACCCTGATGAAATTGACACCGACTCTGCCTACATTCTTTTCTATGAGCAGCAGGG 4109
Query 673 -------------------------------------------------------------------------- 672
Sbjct 4110 GATAGACTACGCACAATTTCTGCCAAAGATTGATGGCAAAAAGATGGCAGACACAAGCAGTACGGATGAAGACT 4183
Query 673 ----------------------------------- 672
Sbjct 4184 CTGAGTCTGATTACGAAAAGTACTCTATGTTACAG 4218
