Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11391
• Subject: NM_001270406.2
• Aligned Length: 1005
• Identities: 267
• Gaps: 714

Alignment

Query    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GGGACACAGGGGTCTTTCGAGGCCAGGTGTATTTCGAGCCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCA----GGCTGAGTCAGGCAGGAGCCCGCGTGAAGAT  440
                                 |..||||...||.|.|||    |||    .||||||..||.||         |
Sbjct    1  ---------------------ATGGAAGCCAGCCCAGCATCCGGGC----CCAGGCATAAGACC---------T  40

Query  441  -CATGGACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAATGAAGGTCAGCAATTCATGCCTTGG  513
             |.||..|||.||||    ||.| .|..||||             ||||||       |||       |||.||
Sbjct   41  ACCTGTGCTACGAAG----TGGA-GCGCCTGG-------------ACAATG-------GCA-------CCTCGG  82

Query  514  TACAAATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAAAGGAG-ATTCT-------CAGGCTAAGAATC  579
            | |||    ||||.|           ||.||||          |||.| .||||       |||||||||||||
Sbjct   83  T-CAA----GATGGA-----------CCAGCAC----------AGGGGCTTTCTACACAACCAGGCTAAGAATC  130

Query  580  TTCTCTGTGGCTTTTACGGCCGCCATGCGGAGCTGCGCTTCTTGGACCTGGTTCCTTCTTTGCAGTTGGACCCG  653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  131  TTCTCTGTGGCTTTTACGGCCGCCATGCGGAGCTGCGCTTCTTGGACCTGGTTCCTTCTTTGCAGTTGGACCCG  204

Query  654  GCCCAGATCTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCG  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  205  GCCCAGATCTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCG  278

Query  728  TGCGTTCCTTCAGGAGAACACACACG------------------------------------------------  753
            ||||||||||||||||||||||||||                                                
Sbjct  279  TGCGTTCCTTCAGGAGAACACACACGTGAGACTGCGTATCTTCGCTGCCCGCATCTATGATTACGACCCCCTAT  352

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct  353  ATAAGGAGGCACTGCAAATGCTGCGGGATGCTGGGGCCCAAGTCTCCATCATGACCTACGATGAATTTAAGCAC  426

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct  427  TGCTGGGACACCTTTGTGGACCACCAGGGATGTCCCTTCCAGCCCTGGGATGGACTAGATGAGCACAGCCAAGC  500

Query  754  -------------------------------------------  753
                                                       
Sbjct  501  CCTGAGTGGGAGGCTGCGGGCCATTCTCCAGAATCAGGGAAAC  543